G21608


Basic Information

Item Value
gene id G21608
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22367349 ~ 22367689 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU25118
aaacaatacaacacctgactaacagtcaaaacaatacaacacctgactaacagtcaaaacaatacaacacctgactaacagtcaaaacaatacaacacctgactaacagtcaaaacaatacaacacctgactaacagtcaaaacaatacaacacctgactaacagtcaaaacaatacaacacctgagtaacagtcaaaacaatacaacacctgactaacagtcaaaacaatacaacacctgactaacagtcaaaacaatacaacacctgggtaacagtcaaaacaatacaacacctgggtaacagtcaaaacaatacaacacctgggtaacagtcaaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25118 True 341 lncRNA 0.42 1 22367349 22367689

Neighbor

gene id symbol gene type direction distance location
LOC110508905 twf1 coding upstream 141245 22212332 ~ 22226104 (+)
LOC110508655 LOC100380741 coding upstream 259492 22024629 ~ 22107857 (+)
LOC110508592 LOC106613751 coding upstream 455833 21809564 ~ 21911516 (+)
LOC118946025 LOC106604946 coding upstream 540220 21819189 ~ 21827129 (+)
LOC110508526 bsg coding upstream 564446 21792456 ~ 21802903 (+)
zgc:110339 LOC106573615 coding downstream 64621 22432310 ~ 22435150 (+)
LOC110513869 LOC106560949 coding downstream 252977 22620666 ~ 22623478 (+)
LOC110510174 LOC106573623 coding downstream 345985 22713674 ~ 22869379 (+)
LOC110511054 NA coding downstream 1419804 23787493 ~ 23793379 (+)
LOC110511247 LOC106573632 coding downstream 1437325 23805014 ~ 23822354 (+)
G21598 NA non-coding upstream 10277 22356842 ~ 22357072 (+)
G21580 NA non-coding upstream 38121 22328952 ~ 22329228 (+)
G21578 NA non-coding upstream 40699 22326430 ~ 22326650 (+)
G21573 NA non-coding upstream 50645 22316491 ~ 22316704 (+)
G21545 NA non-coding upstream 99374 22267755 ~ 22267975 (+)
G21614 NA non-coding downstream 14149 22381838 ~ 22382151 (+)
G21618 NA non-coding downstream 23712 22391401 ~ 22391618 (+)
G21619 NA non-coding downstream 24160 22391849 ~ 22392579 (+)
G21620 NA non-coding downstream 24947 22392636 ~ 22395271 (+)
G21625 NA non-coding downstream 31981 22399670 ~ 22400144 (+)
G20773 NA other upstream 799161 21567545 ~ 21568188 (+)
G19400 NA other upstream 2057451 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 2090454 20276590 ~ 20276895 (+)
G19359 NA other upstream 2124474 20242645 ~ 20242875 (+)
G19083 NA other upstream 2451517 19915586 ~ 19915832 (+)
G23109 NA other downstream 1170707 23538396 ~ 23538863 (+)
G23135 NA other downstream 1206903 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 1505332 23872914 ~ 23905175 (+)
ccl4 ccl4 other downstream 2136966 24504638 ~ 24506125 (+)
G24123 NA other downstream 2182836 24550525 ~ 24552435 (+)

Expression


Co-expression Network