G21745


Basic Information

Item Value
gene id G21745
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22583659 ~ 22585920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU25264
aactgcaaattttagagtggccttttattgtccccagcacaaggtgcacctgtgtaatgatcatgccatttaaatcagcttcttgatatgccatacctgtcaggttgatggattatcttggtaaaggagaaatgctcactaacagggatgaaatgtacatatggaacatttctgggatctttcatttcagctcatgaatccagcactttacatgttgcatttatatttttgttcagtgtaataatatTTATATTGACGGTAATAAGTTATATTCTGAACATTACTAACAATGAGTACACATGCactttcatatttaaacattctCCACCAACTGTGTTTAAATATCGCAGCATTTGTATACCTTGTATCCTTATCAGGTCATCGACGGAGATATCATTGCAGTTAGTGCCATTGGGACACTTCAAGAAAAAGCATGTGTAGTTCTCTTTCCAAAAGACAGAGTGATCACAGGTCATATACAGTAAGCCTGTGGAATGAACACAACAAATTAAAAGAAACTCTTGCATGCAGTCAAAATCTTATATTAAACCATCGCCAAATAAGTAATTGCTCAAAATAAATTGTACCCCTTTATGCTTCATTGTGAGCAAGATTCCTGGCACCATGACAATCTGTACATCTCAAATGAATTCAGTAAATTTTCCTGCCATGAATCAAATCAATTCAGACTGAACAGCAGCATGAACCAAAAGCATTTGTTATGTAGGCAACATCAATATGTTACCTCATCACCTTtgggctccagagtggcacagcggtctaaggcactgcatatcagtgcttgaggtgtcactagaCACCCTGGCTcttttccaggctgtatcacaaccggctgtgattgggagtcccaaacggctgcacaattggcctagcgtcatccgggtttggccggtgtaggccgtcattgtaaataagaatttgttcttaactgacttgcctagttaaataaaaggttaaattatctttatttttttaaatacaaaaatatagcTGGTCAACAACTTATCCAAACATTTACCATCCTTATAAAAAAAAGTTACCACAATCAGCCCTGGGAACTTCTTACATTTTCACCACAGCACTAGGGTTGTTTTTACTCTATTTTTTTTGTGCAACTCTTATTTTATTTCATTCCTCTCAGCAACCACTGTCAGGGCTTTTTCATGAGACCTGGGATCCATTACAGAAACAGATGGGAGAAAAACAGGCCTGTTTACACCTCCTTTGATCCCTGCCAAACTGTGTGACTGAAGAGGTAGCTCCAGAACACCTCAGCCTCAACATCCAGCAGTGCCCGCCTGGTGTCTCTTCTCCCACTGCAGAGCAGACCTACTGATGAGGACAACAGGTGGGGGAAATCTTCAGACCAGAGGCAGCCTTGGGCCTGGACCGAAGGAGAGGAGCTAGCCCGTTAGGGAGTCAGTGTGAGAGATAGCAGAGCTAGTTGTGAGACCTCATGTCACACTCCTCCCCGGCCTTATTTTGGAGCTGCTGCTAGTCCTTTGTGGTTAAAAACTTCAGGTGAAATGGCCTAGAGAGCCATTCCTGGTCAGTGACGGCAAACTAATTGGAAGGCCAGACACTTTGTGTTTTAAATTATTCTGCAGCTGTTCCAAATGGGACGGGAAAAGAGTGGAGGGTTGGGAGTTGGGGAAAGCAGGGTCAGTGGGTTTGAAAATCAAAGTTGCAGAgggcccctctctcccctccctcttaaATGACGTGTACCAAACATACAGGTCTCTAAGCTGGAATGCTGAATGATTATGTATTTATAGCGCTTTGTCATACCACACATTACATGCTTCCAGATGGTAATACCAACCTTGTTTTCATGCCCTACTACTCTCAACCCACATTGCATCGTATGCCTCTCAGAAAAGCTGTCGCTTGTTTAGAGTGGATCATGTGGTGGAACTGAAAGAGGGCTGGGCCATTTACAACTAACTCCTCCCGATAAATACTGCCTGGGGTACATGCGTGTACTTGCTGCATGCATCCGACCACTCAGGTGGTGCAGCGTGTGCGGCAAAAGTATTGTAAGATTTAATTAAAGAACATGTCATGACAAAGACTCACCAAAGCAAGGCCAGGCTCATAAACACAGCAAGGCCTAAGCATCCCTTTCATCTTAAATCTGAAACACATGGCTTCTTTGAAATTATATGTCCTTTAGCAGAGATgtgatttgaaaaaaaaaaaaaaaaaaaaa

Function

NR:

description
uncharacterized protein C11orf24-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25264 True 2233 lncRNA 0.60 2 22583659 22585920

Neighbor

gene id symbol gene type direction distance location
zgc:110339 LOC106573615 coding upstream 148509 22432310 ~ 22435150 (+)
LOC110532091 LOC106573613 coding upstream 161377 22281089 ~ 22422282 (+)
LOC110508905 twf1 coding upstream 357555 22212332 ~ 22226104 (+)
LOC110508655 LOC100380741 coding upstream 475802 22024629 ~ 22107857 (+)
LOC118946025 LOC106604946 coding upstream 756530 21819189 ~ 21827129 (+)
LOC110513869 LOC106560949 coding downstream 34746 22620666 ~ 22623478 (+)
LOC110510174 LOC106573623 coding downstream 127754 22713674 ~ 22869379 (+)
LOC110511054 NA coding downstream 1201573 23787493 ~ 23793379 (+)
LOC110511247 LOC106573632 coding downstream 1219094 23805014 ~ 23822354 (+)
LOC110511358 LOC106573633 coding downstream 1286994 23872914 ~ 23905175 (+)
G21748 NA non-coding upstream 6571 22576811 ~ 22577088 (+)
G21744 NA non-coding upstream 7496 22575566 ~ 22576163 (+)
G21656 NA non-coding upstream 96181 22477215 ~ 22487478 (+)
G21650 NA non-coding upstream 109375 22473944 ~ 22474284 (+)
G21653 NA non-coding upstream 114984 22467770 ~ 22468675 (+)
G21782 NA non-coding downstream 43799 22629719 ~ 22630011 (+)
G21783 NA non-coding downstream 44229 22630149 ~ 22630403 (+)
G21785 NA non-coding downstream 47218 22633138 ~ 22633346 (+)
G22180 NA non-coding downstream 126539 22712459 ~ 22712740 (+)
G20773 NA other upstream 1015471 21567545 ~ 21568188 (+)
G19400 NA other upstream 2273761 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 2306764 20276590 ~ 20276895 (+)
G19359 NA other upstream 2340784 20242645 ~ 20242875 (+)
G19083 NA other upstream 2667827 19915586 ~ 19915832 (+)
G23109 NA other downstream 952476 23538396 ~ 23538863 (+)
G23135 NA other downstream 988672 23574592 ~ 23574995 (+)
ccl4 ccl4 other downstream 1918735 24504638 ~ 24506125 (+)
G24123 NA other downstream 1964605 24550525 ~ 24552435 (+)

Expression


Co-expression Network