G21785


Basic Information

Item Value
gene id G21785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22633138 ~ 22633346 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU25304
gttgtccgatgggcctcttcagctaacagtccgacatgctctagacagctagtggACCGTGGCTAGCAGGCTAGGAGATGGtcattcaggggacgtcgcgacggaggagccagttgAAAAAAAACCTTGTGCGAATTacatcggtagtccagtcgtgatgggtcggcggggctccgtgacaggagtaaaaggggtccaggccaaatagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25304 True 209 lncRNA 0.40 1 22633138 22633346

Neighbor

gene id symbol gene type direction distance location
LOC110513869 LOC106560949 coding upstream 9696 22620666 ~ 22623478 (+)
zgc:110339 LOC106573615 coding upstream 197988 22432310 ~ 22435150 (+)
LOC110532091 LOC106573613 coding upstream 210856 22281089 ~ 22422282 (+)
LOC110508905 twf1 coding upstream 407034 22212332 ~ 22226104 (+)
LOC110508655 LOC100380741 coding upstream 525281 22024629 ~ 22107857 (+)
LOC110510174 LOC106573623 coding downstream 80328 22713674 ~ 22869379 (+)
LOC110511054 NA coding downstream 1154147 23787493 ~ 23793379 (+)
LOC110511247 LOC106573632 coding downstream 1171668 23805014 ~ 23822354 (+)
LOC110511358 LOC106573633 coding downstream 1239568 23872914 ~ 23905175 (+)
LOC110512398 LOC106573641 coding downstream 1452323 24085669 ~ 24091336 (+)
G21783 NA non-coding upstream 2735 22630149 ~ 22630403 (+)
G21782 NA non-coding upstream 3127 22629719 ~ 22630011 (+)
G21745 NA non-coding upstream 47218 22583659 ~ 22585920 (+)
G21748 NA non-coding upstream 56050 22576811 ~ 22577088 (+)
G22180 NA non-coding downstream 79113 22712459 ~ 22712740 (+)
G22400 NA non-coding downstream 282958 22916304 ~ 22917005 (+)
G22711 NA non-coding downstream 509919 23143265 ~ 23147531 (+)
G22790 NA non-coding downstream 566106 23199452 ~ 23199686 (+)
G22938 NA non-coding downstream 668807 23302153 ~ 23302443 (+)
G20773 NA other upstream 1064950 21567545 ~ 21568188 (+)
G19400 NA other upstream 2323240 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 2356243 20276590 ~ 20276895 (+)
G19359 NA other upstream 2390263 20242645 ~ 20242875 (+)
G19083 NA other upstream 2717306 19915586 ~ 19915832 (+)
G23109 NA other downstream 905050 23538396 ~ 23538863 (+)
G23135 NA other downstream 941246 23574592 ~ 23574995 (+)
ccl4 ccl4 other downstream 1871309 24504638 ~ 24506125 (+)
G24123 NA other downstream 1917179 24550525 ~ 24552435 (+)

Expression


Co-expression Network