G22350 (LOC106573623)


Basic Information

Item Value
gene id G22350
gene name LOC106573623
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22839845 ~ 22843305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU25921
CTGGCTGTCGAGGCTGCTGTAGTCTCCCAGGTCTGACTCCTGCTCCTCTGTTAGGGACAGAAGCGAGCCCCTCTCCTCACTGTCCAGACGCGCAACAGTTCCCACACCAGAGGAGATCTTCCCAGCATCCTCCTCTCCAGCTAGACCCTCCAAACTGTAACTGCAGACAAAACAATACCATGTTAGTGAAAGAACACTCCACTGGTGTTTCTGGTGAAAGATGTGGTAATTTGTTTAGGGACAGTAGATACAAACACCCTGTTCGATCTTTAAACCCTTGGCAGGAAGTGAACTCACACCCAGCAGATCTTCATGCTCCAGAAAGGATGACACAATCAGTTATTTCAAAACTGAAACCACACAAGTGGAGAGCACAAGTACATACAGATATACACAgttaaaggaaaaatccactccaaaaaatattttttatttttttaaattagcccactgttgatacagtcccaaaatgttttgcatgtcagcagttaCGTTTTGAAGATATTCGattttcaagaagcaaagtgtcacttgCCACATCATGATAATGATGCGTTTTGCACATCTTGATATCTTGAGAACttgaaaaaaataacaaaatatattttttgagtGGATTTGTCCTTTAACTAGATCCCTGCAGTGAGGAGATGATGAGATACAGAAAAGAGGAAAAGCATGTATAGACAAAGAAAATACATATGAACACCAGCACAAACAGGAAGAAACACATACATGTAAACCTAAACACAAATGTAAGAGGGAAATAACTGAagtaaaataaacataaaaatacAATTCCCAAGCTTCAAATCAGTTAAACAACCTAGCTAACTTGATTAAAAAGTGTAGCATGTTAAATAATAGGCGACAAATAAACCCCTTTGAGACCATACATATGTCATTTATGAATGCATAAGAAATCAGCATTCACTATTAGAGTACAACAGATCTATTATCTCATTCTAGCTGTGTGTCAATTGATCCTCTCACTGAAGCTGTAAGTCTGGCTAAGCGAGATGAACAGAACTAAAACCATAACTCACCTGTCTGGctcactgatgatgatgatgactataTTAGTCATTCTAATCTTTGCAATAGTTAACAAGCAGTGTAGCAGTATAATACTATTGTTCTAAAGATGCTTGATGCTTCCTCTCTAAATTCTAGCTTCCTTGTCtcagaagagcgagagagagagacagagagagagagaggggaagaagataAGTGACTGTGCATCGCTGAGGTCGACCACAACTGACCAACAAGGTGAATAAGACAAAGATAGAGCAACAGCAGCAGTGACAAAGCATACACCAAGCCAGAGACACACCAAGCCAGAGACACACCAAGCCAGAGACACACCAAGCCCGAGACACACCAAGCCAGAGACACACCAAGCCAGAGACACACCAAGCCAGAGACACACCAAGCCAGACACAGACATGCACAGAACAGAGAACATGCAGaggcctcttcctctctttttatttatttcattttgtttgtgtgtttgtcctcTTAAGCTATTAGTTGACACGGTGATGGCATACCTTCTGCTATCAATCTGTGCCGGGTGGGGAGGGGGGACGTTGGAGGGACACCAGCTCATACTGACAGGGAgaagccagggagggagagggatggaaagggacaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagagacagacaggagcagAAGGGAAAGGGTGATGTTATTTCAGGGTGAGATGTGATGGTCAAAGGGGTGAGTTAATGGGTAAGGTTTTTTTCCCATTGAGGTGTCTTGATACATATCATATTGgagagataaataaataaaaacaataaagtTTTCACTGTCTTCATTCTTTATATGTTTTAGAAATGATTTTTCAATTGCATAAGGCAcataaaatacaatttgatttgattagggaGTGCTCAATATAGGTAGCAATGCATTTTACATTTTCTTTCTGTAATTAAAACACAGCTTGGCAGTGACACACCAGGGAGAGTCAGAATGGAAACAGTGAGGAATAACTGTGTGGTACCTTCTCCTATGAAATGTTGGCTTTCGAGGCTTCCCTTCCCCTTGACCTTGCAATAAActgagaagagatggagagatgaggagaggacagaacagatgggatgaacagagagagatgagagcacTGACAGTACAGAACATGATCACATGGGTGATAATGAATAAAAGGAAAATGGTGCCAATAAAAATCACAGTGTTTAACCTTTGACCTGGACCAGGTCTTTCCCACAAAGTCCACTGACACAGAGGTGCCTCCAGGCTtatctaactgtactgtataAGGCTCCCTGAGGGAAAAGCATGGATTaaatacacacagagacaaataTCTACATACACATgcgctcacacacaaacagtggcccactgacacacaaacacaaagtgTCTGAACTTGAGGCCGTATGAGGACCAGTCCTCGGAAAGCAAGTCTCTGTCAGTCTCATCCCTGCAGACTGCGCTTCCCAGGGTACTACTGTCTCAAGTGACTCCCCAATAGATATCATCATACCGAGGACAAGTCAGGATACTGACTTGGAGGCTTATGGTTCACACAGATTATGACTTTTCACCACTCATCCATAGCTATCCTTCCTGGGTATGTACTATAGGGTAGTGAGTGTGTTGAGTTAGAGGTCAGTGTGTGGGGTTAAGAGGACTCACCTGCGTTGGTTCATGTCTGTGTCTCCTGCAGGATTCTTCCCCGGGCCCCAGCTGTGCCGGCGGAATGGAGAGAGCGAGCGGATAGAGGAGCGCAGGATAGCGGAGCACACAGGCACCTCTGTCAGCTTGTctttcctctcgtcctcctctccgtccctccctgTCGTCTGCCAGGCGTCTCCGGCACTCCAACTGGCCCTAGTGCTCAACACCCCTGCCCCCGCCCCAGTCCAAGCGGGGCCCACTCTGCCCTGGGAGGAGACACTGAGAGGACCCACACTGCCCTGGGAGCTGGCGCTGAGGGGACCCACACTGGCCACGTCGTCTATGGAGGAGAAGGACACCGACACACCACTGTTGCTTTCACTTGGCCCAGTCACAGCCTTCTCT

Function

NR:

description
A-kinase anchor protein 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25921 True 3141 TUCP 0.46 2 22839845 22843305

Neighbor

gene id symbol gene type direction distance location
LOC110510003 LOC106573622 coding downstream 143331 22655517 ~ 22696514 (-)
LOC110532107 LOC106573785 coding downstream 190252 22640169 ~ 22649593 (-)
LOC110532100 LOC106573785 coding downstream 199853 22639234 ~ 22639992 (-)
LOC110509695 LOC106573621 coding downstream 247200 22580312 ~ 22592645 (-)
LOC110509621 LOC106573620 coding downstream 264907 22492560 ~ 22574938 (-)
LOC110510264 LOC106560960 coding upstream 72065 22915370 ~ 22956393 (-)
LOC110510575 LOC106573628 coding upstream 477766 23321071 ~ 23619775 (-)
LOC110510928 det1 coding upstream 925988 23769293 ~ 23774865 (-)
LOC110511130 LOC106573631 coding upstream 978351 23821656 ~ 23861029 (-)
LOC110511707 LOC106573634 coding upstream 1098590 23941895 ~ 23945943 (-)
G22181 NA non-coding downstream 127107 22712533 ~ 22712738 (-)
G22133 NA non-coding downstream 194167 22645454 ~ 22645678 (-)
G22127 NA non-coding downstream 203282 22636327 ~ 22636563 (-)
G22116 NA non-coding downstream 218520 22621125 ~ 22621325 (-)
G22590 NA non-coding upstream 203254 23046559 ~ 23046779 (-)
G22593 NA non-coding upstream 205198 23048503 ~ 23048740 (-)
G22693 NA non-coding upstream 287236 23130541 ~ 23130774 (-)
G22901 LOC100136012 non-coding upstream 437998 23281303 ~ 23281631 (-)
G22908 NA non-coding upstream 442364 23285669 ~ 23286052 (-)
G21993 NA other downstream 457637 22381870 ~ 22382208 (-)
LOC110507736 LOC106573601 other downstream 1292072 21535882 ~ 21565723 (-)
LOC118945319 NA other downstream 1750595 21085298 ~ 21089250 (-)
G20266 NA other downstream 2039837 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 3207228 19630376 ~ 19633058 (-)
G23394 NA other upstream 780721 23624026 ~ 23624349 (-)
G24542 NA other upstream 1379602 24222907 ~ 24226490 (-)
LOC110514811 ccl8 other upstream 1709286 24552392 ~ 24554074 (-)
znf276 znf276 other upstream 2020782 24853824 ~ 24865158 (-)

Expression


Co-expression Network