G23393


Basic Information

Item Value
gene id G23393
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 23623829 ~ 23624293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU26998
aagaagagacagaggaaacaggagggatagcagacattaaacatttcacatgacaagagacgttccaggagaggatagaattactagaccaattaatagaaggattatgacaaactagccagggatggcccaaaacaacaggtgtaaaaggtgaacgaaaaattaaaaaagaaattgtttcgctatgattaccagagacagtgagggttaaaggtagcgtctcacgctgaatcctggggagaggactaccatccaaggcgaacaaggccgtgggctcccttaactgtctgagaggaatgtcatgttcccgagcccaggtctcgtccataaaacagccctccgccccagagtctattaaggcactgcaggaagctgacgaaccggtccagcgtagatggaccgacaaggtagtgcaggatcttgaaggagagacatgagtagtagcgctcaccagtagccctccgc

Function

NR:

description
Pol polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26998 True 465 lncRNA 0.35 1 23623829 23624293

Neighbor

gene id symbol gene type direction distance location
LOC110510174 LOC106573623 coding upstream 754450 22713674 ~ 22869379 (+)
LOC110513869 LOC106560949 coding upstream 1000387 22620666 ~ 22623478 (+)
zgc:110339 LOC106573615 coding upstream 1188679 22432310 ~ 22435150 (+)
LOC110532091 LOC106573613 coding upstream 1201547 22281089 ~ 22422282 (+)
LOC110508905 twf1 coding upstream 1397725 22212332 ~ 22226104 (+)
LOC110511054 NA coding downstream 163200 23787493 ~ 23793379 (+)
LOC110511247 LOC106573632 coding downstream 180721 23805014 ~ 23822354 (+)
LOC110511358 LOC106573633 coding downstream 248621 23872914 ~ 23905175 (+)
LOC110512398 LOC106573641 coding downstream 461376 24085669 ~ 24091336 (+)
LOC110512529 LOC106573640 coding downstream 481053 24105346 ~ 24114557 (+)
G23391 NA non-coding upstream 1823 23621725 ~ 23622006 (+)
G23168 NA non-coding upstream 7017 23616583 ~ 23616812 (+)
G23156 NA non-coding upstream 22457 23601154 ~ 23601372 (+)
G23130 NA non-coding upstream 56042 23567525 ~ 23567787 (+)
G23121 NA non-coding upstream 67494 23556075 ~ 23556335 (+)
G23395 NA non-coding downstream 669 23624962 ~ 23625163 (+)
G23409 NA non-coding downstream 9448 23633741 ~ 23633944 (+)
G23416 NA non-coding downstream 12857 23637150 ~ 23637376 (+)
G23492 NA non-coding downstream 75642 23699935 ~ 23700577 (+)
G23544 NA non-coding downstream 114634 23738927 ~ 23739131 (+)
G23135 NA other upstream 48834 23574592 ~ 23574995 (+)
G23109 NA other upstream 84966 23538396 ~ 23538863 (+)
G20773 NA other upstream 2055641 21567545 ~ 21568188 (+)
G19400 NA other upstream 3313931 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 3346934 20276590 ~ 20276895 (+)
ccl4 ccl4 other downstream 880362 24504638 ~ 24506125 (+)
G24123 NA other downstream 926232 24550525 ~ 24552435 (+)
G24295 NA other downstream 1215692 24839985 ~ 24840462 (+)
G24307 NA other downstream 1232651 24856944 ~ 24857251 (+)

Expression


Co-expression Network