G23395


Basic Information

Item Value
gene id G23395
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 23624962 ~ 23625163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU27000
acgagcggcattcagtgggctccccagagtaacacggcgggttattgattctgggctccggagattcgaaagccctggaagtggccggtggatcgaggcggagatggtgaacctgttctgtgaggtgggagacttgggtggccagggtctcaacggcatgtcgagcagcagacaattcctgctcgtgtctgcctagcatcgc

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27000 True 202 lncRNA 0.35 1 23624962 23625163

Neighbor

gene id symbol gene type direction distance location
LOC110510174 LOC106573623 coding upstream 755583 22713674 ~ 22869379 (+)
LOC110513869 LOC106560949 coding upstream 1001520 22620666 ~ 22623478 (+)
zgc:110339 LOC106573615 coding upstream 1189812 22432310 ~ 22435150 (+)
LOC110532091 LOC106573613 coding upstream 1202680 22281089 ~ 22422282 (+)
LOC110508905 twf1 coding upstream 1398858 22212332 ~ 22226104 (+)
LOC110511054 NA coding downstream 162330 23787493 ~ 23793379 (+)
LOC110511247 LOC106573632 coding downstream 179851 23805014 ~ 23822354 (+)
LOC110511358 LOC106573633 coding downstream 247751 23872914 ~ 23905175 (+)
LOC110512398 LOC106573641 coding downstream 460506 24085669 ~ 24091336 (+)
LOC110512529 LOC106573640 coding downstream 480183 24105346 ~ 24114557 (+)
G23393 NA non-coding upstream 669 23623829 ~ 23624293 (+)
G23391 NA non-coding upstream 2956 23621725 ~ 23622006 (+)
G23168 NA non-coding upstream 8150 23616583 ~ 23616812 (+)
G23156 NA non-coding upstream 23590 23601154 ~ 23601372 (+)
G23130 NA non-coding upstream 57175 23567525 ~ 23567787 (+)
G23409 NA non-coding downstream 8578 23633741 ~ 23633944 (+)
G23416 NA non-coding downstream 11987 23637150 ~ 23637376 (+)
G23492 NA non-coding downstream 74772 23699935 ~ 23700577 (+)
G23544 NA non-coding downstream 113764 23738927 ~ 23739131 (+)
G23559 NA non-coding downstream 138540 23763703 ~ 23764041 (+)
G23135 NA other upstream 49967 23574592 ~ 23574995 (+)
G23109 NA other upstream 86099 23538396 ~ 23538863 (+)
G20773 NA other upstream 2056774 21567545 ~ 21568188 (+)
G19400 NA other upstream 3315064 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 3348067 20276590 ~ 20276895 (+)
ccl4 ccl4 other downstream 879492 24504638 ~ 24506125 (+)
G24123 NA other downstream 925362 24550525 ~ 24552435 (+)
G24295 NA other downstream 1214822 24839985 ~ 24840462 (+)
G24307 NA other downstream 1231781 24856944 ~ 24857251 (+)

Expression


Co-expression Network