G23830


Basic Information

Item Value
gene id G23830
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 23901670 ~ 23905158 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU27476
TCATTATTTTCTCCACATAACTCAAAAACAAACAGACCCCCAAAAAGTTAATaaataaaagaggagaggagagagaaaaagaactgGGCATGCTTGGGCATGCGATGGGCTCTCAAGGTGATGGGTACTTCCAGTCGGAATGGTAGAAAAACCACAGGAACAGGGACATCACCTCTGCACCTCTCAGCATCAAGACCCGCTGGACCAATATTCATAGTTATTCTTTGAATCAGTGAACCATTTCCCATAATATCCCTTAACCATCTTACAGTATCAGTCCAGTTTCCAACAGTACCTCAGTAAGTCAAGACTGGGGGAgcaaaccacaggaggttggtggcaccttaattggggaggatgggcttgtggtaatggctggagcggaattagtggaatggcataaaatacatcaaacacatggtttccatgtgtttgatgcaacTCCATTTACTCCGATACAGCCATcaatatgagccgtcctcccctcagcagcctccactggcgcAAACGTTCTTGAAAAATATAACTCCAAGCATTTGGCCCCAGCTTTCATTCCTTCACATCGGCAGCTCTGTTTGACTTTGCTGGATAGAGAAACGGAGAGGTatgggaggaagagaagagagcacACATACTGTAGATTGTGAATGATTACTGACTGGAGGACCAAGACAATCAGGAGGGAGTACTAGCCCATTACAGACATGCTATAAATGTCTCAGAGTGTTTGAGTTAGTTAGCCAGCTATAAAAAATACACAAAACATTTCTCTCTTagtttgtctgtttttttttctctgttgTTTAGTTCCGTCTAAGATGTGGGCTTTGTCATGGAGAAGCAGTGGGATGCAGTAGACTGTCTGATTCCTTTACTGTACCGTACTATAGCTCCAGCCCAGGCTATCCTATGGAAGATTCTGCTTCTCAGAACAGTACTGGACAACACCTGGAAAGGTTCTGCTTGCTCACAACTAAGAGGAAATTGGCAAAGCCAGTAAAAGACAACCTTTCCTCATTGGGatgacattttaaaatgtttttattttttttatatttttttttcaaaaaaaatgtatacaaatctAAAACATACTTGACCATGCAttttagaatatattttttttctttataaACTTTATAAAACAAGGCAGTTGGCGTTTTTTCAGACGTCTTGCAAATAGCTAAAAATGTTGATGATTTTTTTCTGTCTTGGGAAATCGTTGTTTTGAAAGCAGCAGTTTGAAACGTAACAGTCTCTGAACTTGTACTTGGGCACACCCGTCTCTTACTGTACGGCGAGCCAGTGGCTCCAGACCAGGTGTGTGGGGTGAGGTTTGGGAAGAAACCTTtagtcattatactgtaatgagaaagagagagagagagagagagagagagagagactctgttGGGGCCAAAGGGGCAGTTAGATGACAACTGACAGAATGTCATGCCCTACAGTCCTCATATGAAGTTCAACCTGTACATTAAAGACCAGAGAGATACTGATGAAGTTGGTTGGAATGTTAATATTTTATACAAATCTAGCGTATAATAACTCCACTGGACAGACGTGCATGAGCATTGTACCTGTTGTGTACATGGaattgtacagtgtgtgtgtgtttgagagttcTTTCCTTTAGATCATGATTTCCTTTTGTTGTAGACTACAGAGAGAATCTTTAACATTAGAGACTTTTGTTGTAGACTACAAAGAGAATCTTTTACATTAGAGACTTTTGTTGTAGACTACAGAGAGAATCTTTAACATTAGAGACTTTTGTTGTAGACTACAGAGAGAATCTTTTACATCAGAGACTTTTGTTGTCGACTATAGAGAGAATCTTTTACATTAGAGACCTGGATGAAGTCCTTTCAGACAGAACTATTCCTACTCCGGTTGCGGACGGATTAGAGTTGATAAAGAGTAGATCCTCGTGCATGTTTCAATCTTGGTAACCCACGTTGCTAAATTTACAAACGGTTTGCTAACATAGATAGGTATAGTGTTATAGTTGTTAGAGGCAAATTTGTATTGGTCATCCTGGTTTTTCAGATTGTAAACATGTCCTGTTGCTGACCAGATTCTGTAGTTGCAAAAGTTTTTTTGCAGCCCTATTTTTATTTAATCATATTTTCATGAAAGAAGGAAACAAAATGAAGTCTTGGTGAAAATGGTTGGTTGTTAGGATTTGGGGAGCATGGTGGGGTATAAAATGAAAGGAGACTTACATGAAACAAGGAAAAGAGGGTAACAAGATATGGAGTGATGTCATGAGTGGACTACCGGGAAGGGGAAGGATGGGTGGTGAGAGGCTGAACTTATAATCGTGAAGGGGAACAACGTGCCAGAAGGGTGATATGTGCAGGGGTAGAGGATGGGGAGGGTTCGGAGGGCACTGGgtaggacaggggacagggggcCGTTTCCCATCCCTTTGAACCTTGTATTACTGGGTGGACAACACCTGTGTTCAAATACtacttgaaatctttcaaatactttcagcatttgctttagcctgcctcaACTGTCAGGTAGGCATtgttttgcacttttgggacttttCTATTGTTTCCACTGCAACAggtaagctcaatcaagcacagatacagtatttaaatatattattaaatagtatttgaacccaggtcaggTGGACACAGTCAGAACCAGAGTAGATACATTATCTTCTGCCTCATTTGACCCACTACACCATCATACAGGCAGTGCCACCACTCATCTGAGTCTACCTCCAGAAACAAACTCAATCAAAAGAACATCAGCAATATCAACAGAGAGAAAAGGCAATTAAGGaatacaaaataatatatattaacATGTCATATGTGATAAATAAAATTAATCATTTTAATTATACGTTTTTAAACGATGATTTAAGAAGAAGAACAGGTAATTTCAGGGAGAGAAATCCAAAATGTTTTGCAGATGTTTTGCAGATAACTGCTTCTCTGAAATCTGGGCATTGGGAACCATCTGTATCCCCATATTGTTTATCCTCTTACTATATTCTTTACAGAAGTGTCAAATGGTCAAGGTCTGGTTACTGATAGTCATGATAGTACTCATAATAATGTATAATCATAAAAGGAATCAATAGGCAATACATGTTTAAATAAAAAAGTGGATAAACAAAATTGCGACTCCAATGTTGAGCAAAATCACCATGACGACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27476 True 3202 lncRNA 0.40 2 23901670 23905158

Neighbor

gene id symbol gene type direction distance location
LOC110511130 LOC106573631 coding downstream 40641 23821656 ~ 23861029 (-)
LOC110510928 det1 coding downstream 126805 23769293 ~ 23774865 (-)
LOC110510575 LOC106573628 coding downstream 281895 23321071 ~ 23619775 (-)
LOC110510264 LOC106560960 coding downstream 945277 22915370 ~ 22956393 (-)
LOC110510003 LOC106573622 coding downstream 1205156 22655517 ~ 22696514 (-)
LOC110511707 LOC106573634 coding upstream 36737 23941895 ~ 23945943 (-)
LOC110511826 LOC106573635 coding upstream 76057 23981215 ~ 24015777 (-)
LOC110512077 LOC106573636 coding upstream 129067 24034225 ~ 24049433 (-)
uba2 sae2 coding upstream 145151 24050309 ~ 24072410 (-)
LOC118948024 NA coding upstream 186446 24091604 ~ 24102924 (-)
G23808 NA non-coding downstream 47982 23853285 ~ 23853688 (-)
G23805 NA non-coding downstream 55059 23846361 ~ 23846611 (-)
G23804 NA non-coding downstream 55490 23845959 ~ 23846180 (-)
G23801 NA non-coding downstream 58870 23842233 ~ 23842800 (-)
G23799 NA non-coding downstream 62139 23839234 ~ 23839531 (-)
G23831 NA non-coding upstream 1739 23906897 ~ 23907116 (-)
G23832 NA non-coding upstream 3099 23908257 ~ 23908561 (-)
G23833 NA non-coding upstream 3754 23908912 ~ 23909237 (-)
G23838 NA non-coding upstream 7724 23912882 ~ 23913107 (-)
G23839 NA non-coding upstream 9960 23915118 ~ 23915358 (-)
G23394 NA other downstream 277321 23624026 ~ 23624349 (-)
G22350 LOC106573623 other downstream 1058365 22839845 ~ 22843305 (-)
G21993 NA other downstream 1519462 22381870 ~ 22382208 (-)
LOC110507736 LOC106573601 other downstream 2353897 21535882 ~ 21565723 (-)
G24542 NA other upstream 317749 24222907 ~ 24226490 (-)
LOC110514811 ccl8 other upstream 647433 24552392 ~ 24554074 (-)
znf276 znf276 other upstream 958929 24853824 ~ 24865158 (-)
LOC118956210 NA other upstream 1023190 24910984 ~ 24938701 (-)
LOC110518671 klhl36 other upstream 1039750 24944908 ~ 24972465 (-)

Expression


Co-expression Network