G23940



Basic Information


Item Value
gene id G23940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 24082092 ~ 24082376 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU27590
ctccatcaacaaacattggcagtagaatagccttactgaagagctcagtgactttcaacgtggcaacgtcataggatgccacctttccaacaagtcagttcgttaaATGTctgacctgctagagctgccctggtcaactgtaagtgctgttattgtgaagtggaaacatctaggagcaacatcagctcagccacgaagtggtagtccacacaagctcacagaacggacgGCCGAATACTGAAGCacatagcgtgtaaaaatcgtctgtcctcggttgcaacaccc

Function


NR:

description
PREDICTED: uncharacterized protein LOC109614805

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU27590 True 285 lncRNA 0.48 1 24082092 24082376

Neighbor


gene id symbol gene type direction distance location
uba2 sae2 coding downstream 9682 24050309 ~ 24072410 (-)
LOC110512077 LOC106573636 coding downstream 32659 24034225 ~ 24049433 (-)
LOC110511826 LOC106573635 coding downstream 66315 23981215 ~ 24015777 (-)
LOC110511707 LOC106573634 coding downstream 136149 23941895 ~ 23945943 (-)
LOC110511130 LOC106573631 coding downstream 221063 23821656 ~ 23861029 (-)
LOC118948024 NA coding upstream 9228 24091604 ~ 24102924 (-)
ccdc113 ccdc113 coding upstream 36848 24119224 ~ 24126628 (-)
LOC110513500 LOC106573646 coding upstream 150840 24233216 ~ 24288176 (-)
LOC110513605 LOC106573647 coding upstream 215322 24297698 ~ 24343156 (-)
LOC110513914 LOC106573648 coding upstream 325669 24408045 ~ 24410610 (-)
G23932 NA non-coding downstream 6407 24075401 ~ 24075685 (-)
G23839 NA non-coding downstream 166734 23915118 ~ 23915358 (-)
G23838 NA non-coding downstream 168985 23912882 ~ 23913107 (-)
G23833 NA non-coding downstream 172855 23908912 ~ 23909237 (-)
G23832 NA non-coding downstream 173531 23908257 ~ 23908561 (-)
G24514 NA non-coding upstream 14200 24096576 ~ 24096892 (-)
G24515 NA non-coding upstream 21172 24103548 ~ 24104450 (-)
G24504 NA non-coding upstream 28668 24111044 ~ 24112648 (-)
G24507 NA non-coding upstream 34423 24116799 ~ 24117790 (-)
G23394 NA other downstream 457743 23624026 ~ 23624349 (-)
G22350 LOC106573623 other downstream 1238787 22839845 ~ 22843305 (-)
G21993 NA other downstream 1699884 22381870 ~ 22382208 (-)
LOC110507736 LOC106573601 other downstream 2534319 21535882 ~ 21565723 (-)
G24542 NA other upstream 140531 24222907 ~ 24226490 (-)
LOC110514811 ccl8 other upstream 470215 24552392 ~ 24554074 (-)
znf276 znf276 other upstream 781711 24853824 ~ 24865158 (-)
LOC118956210 NA other upstream 845972 24910984 ~ 24938701 (-)
LOC110518671 klhl36 other upstream 862532 24944908 ~ 24972465 (-)

Expression



Co-expression Network