G24504


Basic Information

Item Value
gene id G24504
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 24111044 ~ 24112648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU28242
accaatcagtgaggatagagcagcttgctatggcACGGGCAAGCAATAGTTGTCTGACATCTATCTACTGCATGGGTAAACAAGTGTAGGGCGCGAGATGCGATTGAAATTTTCCAGGTGGGGAAAGATCGAGAGAGGTTGGAGGAGGCGGCATGAAGTGCTGGGCATCTTgtgatgacatgcattatctgaactaggcccacagaattatacctacggaggagcggcttatatgaaggaactttgaatgtctttgaacttgaAAAGAGTTGGCTTAAAGTTGGACGAGAGCTAACTAACAaacttgtgtgtgcagagcggcatcagaattaaaataaaaaacacatcttacctttttgtagttaataaatccaatgagAAACGTGATAAGGATACTATAGTTAACCAGCATTGATAAAGTTAATCCATTCTACTCGAATAAAAAAAATCTCTACATTTCTGAATCACGCATGTaacgtcagtaggctacagtgcttcggagggggagggacaggtaaactacacacacacaaagattttctgagtgacagagtgagggctttgcataggcgcATTGTTGCGTTTGTGGGACTGTAAAAAAAATACCTGGAATGTAAAATAACATTATTACCCGGTTCCCgtgcttttaaaataacggttctgttccagaacagtatagatcacttcCGTTCCCGGTTCTGATCATCATTTTTGTTTTAGTGATATTtctggttctgttccctgaaccggttccattTCCTGATATGCATACACTGCTACTACAGTGATTAGGTTGTGGAAAAGTAACAATACACAATCATTTCAACCCTCCACCCACCAAACAAAACATTTTATATCAGAGTTGATACAGCGTCATTGATTCCAAAATAAAAAAAGCAAGAGGCCATCAGTAGACTAGCAGCTGCTGAAACTTAGCAATCATAAAAGTCTTGAGTATCCTGGGTAAGAGAATGGAACATTAATGCATGCAGGATCTCTGTAGATGCATTCTATAGTGACAACCACTGTTGGCAAGAGAATAGTTCTGGGTCATGGTGCAACACACCGGTCAAGCAGGTCATCACAAGGGGAACTGGTCCACATCGCCTTTTTTTCTTTTTAATCTACAagGTAATTTATGTACAAATGCAAAGCTTTTCATAGACAGAAATGTAGGCGAATGTGGTGATTTACATTAATTTTTTTCCCCACTTGCAAGGAAGTTGATTCAAGAAGGTAAGGATAGATAAGAGTAAATGACCTGGGCTTGAACATCCACCCTAGTGTTTGAAGTGAAAGACATATCCTTGTTGGTGTCTCCTCTGTCCTTCAGACAGTAGCCCTAAAGCAGTGACACTTGGCAGTGActtctatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28242 True 1375 lncRNA 0.41 2 24111044 24112648

Neighbor

gene id symbol gene type direction distance location
LOC118948024 NA coding downstream 8120 24091604 ~ 24102924 (-)
uba2 sae2 coding downstream 38634 24050309 ~ 24072410 (-)
LOC110512077 LOC106573636 coding downstream 61611 24034225 ~ 24049433 (-)
LOC110511826 LOC106573635 coding downstream 95267 23981215 ~ 24015777 (-)
LOC110511707 LOC106573634 coding downstream 165101 23941895 ~ 23945943 (-)
ccdc113 ccdc113 coding upstream 6576 24119224 ~ 24126628 (-)
LOC110513500 LOC106573646 coding upstream 120568 24233216 ~ 24288176 (-)
LOC110513605 LOC106573647 coding upstream 185050 24297698 ~ 24343156 (-)
LOC110513914 LOC106573648 coding upstream 295397 24408045 ~ 24410610 (-)
LOC110514811 ccl8 coding upstream 439744 24552392 ~ 24554074 (-)
G24515 NA non-coding downstream 6594 24103548 ~ 24104450 (-)
G24514 NA non-coding downstream 14152 24096576 ~ 24096892 (-)
G23940 NA non-coding downstream 28668 24082092 ~ 24082376 (-)
G23932 NA non-coding downstream 35359 24075401 ~ 24075685 (-)
G24507 NA non-coding upstream 4151 24116799 ~ 24117790 (-)
G24550 NA non-coding upstream 57685 24170333 ~ 24178502 (-)
G24541 NA non-coding upstream 115391 24228039 ~ 24231869 (-)
G24621 NA non-coding upstream 195951 24308599 ~ 24308889 (-)
G24670 NA non-coding upstream 302454 24415102 ~ 24415964 (-)
LOC110511130 LOC106573631 other downstream 284553 23821656 ~ 23861029 (-)
G23394 NA other downstream 486695 23624026 ~ 23624349 (-)
G22350 LOC106573623 other downstream 1267739 22839845 ~ 22843305 (-)
G21993 NA other downstream 1728836 22381870 ~ 22382208 (-)
LOC110507736 LOC106573601 other downstream 2563271 21535882 ~ 21565723 (-)
G24542 NA other upstream 110259 24222907 ~ 24226490 (-)
znf276 znf276 other upstream 751439 24853824 ~ 24865158 (-)
LOC118956210 NA other upstream 815700 24910984 ~ 24938701 (-)
LOC110518671 klhl36 other upstream 832260 24944908 ~ 24972465 (-)

Expression


Co-expression Network