G24542


Basic Information

Item Value
gene id G24542
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 24222907 ~ 24226490 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU28304
ttgtgtaaaacctagtttaaatgtatttggctaaggtgtatgtaaacttccgacttcaactgtatgtgctgtagAGATTATCAACCAATAATATTCCTCTGAAGCAGTCATGGTTTTCTTTTTTAGTCAGTCAAATGATAAAAATGCATCAAAAGGAATTTCAGTACCTTTTTGGATGATTAGCTAtgtttagtttatttagtcaaaCACAACCATCAACCCAGCTGTTTATATTCATCCAACACTGCATCTGTTCTAAAATCTTCCTTTTTACAAGATACAGATAATGCACATGTAAAAACATAACATATTCCAACATCAAGCTCATCATCAATCCATATGTTTAAATATAGTCATCTTCCAATAAAAGTACACAGATATTATGTGATATCAAGTGCTTTCAGTGGTGTTGCAATGTGCCTGAAGCGTATAACATGACACTCATAATGTGAAAGTACATGCTTAGAAAAAagagttccaaaagggttcttcgggaAGTCCCCTTAggagaatcctttttggttccaggtagaacccaaaaggcttctacctggaaccaaaaatagttattcaaagggttctcctatgggggcaGGCGAAGATCCCTTTTAGGCTAGATAGCACCTTTCTTCCTAAAAGTGTACATGGAACACACTGTCGGGAAAAATTTAcaaaattatatgcatatttGCACTTGTGTGATTATACAGCAAATGAAATACTTGCATAGTATGtttcacacacacaataaagtccAAAGCTACCCAATATTTCAAGAAGTCTCAAACATACTTATGCTGAAGCTGCATTTACACAACGTACAAAAGCTCTTAGCTCTTGCTCTTTGGTTTTCCTTCATCAGTGCCTCGCCTCTCACTCTAGTACAGGGATGTCAAATATATGGCCCACGGGCTGGATCCGGCCAGCGAAAGGTTCCTATCCGGCCTGCGGGTGGTTTAAGTGTATGtgtatatagagatatagagatatagagatatagagatatagagatatagagatatagagagagatatagagagagagatagatagatagatagatagatagagagagagagagagagagagagagagagagagagagagagagagagagagagatagatagatagatagatagatagatagatagatagatagatagatagatagatagataggttcggcgcatgtgacacatgtttttcctcatcaatctacagtaataataccccataatgacaaagcaaaaacaggtttttagaaatgttatgagactcgaaattgagctcaggtacatcctgtttccattgatcatccatctGTGAGAggtttctagaacttgattggtgtcagacgctccccatccaacttaacagagcttgagaggatctgcagagtggaatgggagaaactccccaaataaaggtgtgccaagcttgtagcatcatacctaagaagatttgagactgtaatcgctgccaaagatgcttcaacaacgtactgagtaaagagtctggatacttatgtaaatgtgatattacagttttacatttttaataaatgtgctaaaatttctaaaaacctgtttttgctttgtcattatggggtaatgtgtgtaggttgatgagtaaaaaaatatgtaatccattttataataagactgtaacgtaacaaaagggggtctgaatacgttcgaatgcactgtatacatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaatttttttttttcatcataggtacacttcaactatgacagacaaaatgagggaaaaaaatccagaaaatcacattgtaggattttttatgaatttatttgcaaattatggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttaagaggctcctctgtcctccactcgttatctgtattaatggcacctgtttgaacttgttatcagtataaaagacatctgtccacaacctcaaaaggtcacattccaaactccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgcaacaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacatacaagaccactgataatctccctcgatctggggctccacgcaagatctcaccccgtggggtcaaaatgatcacaagtgcggtgagcaaaaatcccagaaccacacggggggacctactgaatgacctgcagagagctgggaccaaagtaacaaagcctaccataagtaacacactacgccgccagggactcaaatcctgcagtgccagacgtgtccccctgcttaagccagtacatgtccaggcccgtctgaagtttgctagagagcatttggatgatccagaagaagattgagagaatgtcatatggtcagatgaaaccaaaatataactttttggtaaaaattcaactcgtcgtgttggaggacaaagaatgctgagttgcatccaaagaacaccatacctactgtgaagcatggggatggaaacatcatgctttggggctgtttttctgcaaagggaccaggacgactgatccgtgtaaaggaaagaatgaatggggccatgtatcgtgagattttgagtgaaaacctcgttccatcagcaagggcattgaagatgaaacgtggctgggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttggagggagttgaaagtctgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatggaggaatgggacaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaatgtttgacctctgtcattgccaacaaagggtatataacaaagtattgagataaacttttgttattgaccaagtacttattttccaccatcattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28304 True 3144 TUCP 0.30 2 24222907 24226490

Neighbor

gene id symbol gene type direction distance location
ccdc113 ccdc113 coding downstream 96279 24119224 ~ 24126628 (-)
LOC118948024 NA coding downstream 119983 24091604 ~ 24102924 (-)
uba2 sae2 coding downstream 150497 24050309 ~ 24072410 (-)
LOC110512077 LOC106573636 coding downstream 173474 24034225 ~ 24049433 (-)
LOC110511826 LOC106573635 coding downstream 207130 23981215 ~ 24015777 (-)
LOC110513500 LOC106573646 coding upstream 6726 24233216 ~ 24288176 (-)
LOC110513605 LOC106573647 coding upstream 71208 24297698 ~ 24343156 (-)
LOC110513914 LOC106573648 coding upstream 181555 24408045 ~ 24410610 (-)
LOC110514811 ccl8 coding upstream 325902 24552392 ~ 24554074 (-)
ciapin1 LOC106573658 coding upstream 369595 24596085 ~ 24611535 (-)
G24550 NA non-coding downstream 44405 24170333 ~ 24178502 (-)
G24507 NA non-coding downstream 105117 24116799 ~ 24117790 (-)
G24504 NA non-coding downstream 110259 24111044 ~ 24112648 (-)
G24515 NA non-coding downstream 118457 24103548 ~ 24104450 (-)
G24514 NA non-coding downstream 126015 24096576 ~ 24096892 (-)
G24541 NA non-coding upstream 1549 24228039 ~ 24231869 (-)
G24621 NA non-coding upstream 82109 24308599 ~ 24308889 (-)
G24670 NA non-coding upstream 188612 24415102 ~ 24415964 (-)
G24672 NA non-coding upstream 190463 24416953 ~ 24417509 (-)
G24675 NA non-coding upstream 199833 24426323 ~ 24426650 (-)
LOC110511130 LOC106573631 other downstream 396416 23821656 ~ 23861029 (-)
G23394 NA other downstream 598558 23624026 ~ 23624349 (-)
G22350 LOC106573623 other downstream 1379602 22839845 ~ 22843305 (-)
G21993 NA other downstream 1840699 22381870 ~ 22382208 (-)
LOC110507736 LOC106573601 other downstream 2675134 21535882 ~ 21565723 (-)
znf276 znf276 other upstream 637597 24853824 ~ 24865158 (-)
LOC118956210 NA other upstream 701858 24910984 ~ 24938701 (-)
LOC110518671 klhl36 other upstream 718418 24944908 ~ 24972465 (-)
G25115 zfpm1 other upstream 1054102 25280592 ~ 25281030 (-)

Expression


Co-expression Network