Gene
RNA
| Item | Value |
|---|---|
| gene id | G24734 |
| gene name | ccl4 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 24504063 ~ 24506153 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ccl4 | Enables CCR1 chemokine receptor binding activity; CCR5 chemokine receptor binding activity; and identical protein binding activity. Involved in several processes, including negative regulation by host of viral transcription; positive regulation of calcium-mediated signaling; and positive regulation of natural killer cell chemotaxis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Implicated in acquired immunodeficiency syndrome. Biomarker of several diseases, including COVID-19; Plasmodium falciparum malaria; autoimmune disease (multiple); lung disease (multiple); and nose disease (multiple). |
| description |
|---|
| CCL4 protein precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU28520 | True | 1407 | lncRNA | 0.42 | 3 | 24504063 | 24506153 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513914 | LOC106573648 | coding | downstream | 93453 | 24408045 ~ 24410610 (-) |
| LOC110513605 | LOC106573647 | coding | downstream | 160907 | 24297698 ~ 24343156 (-) |
| LOC110513500 | LOC106573646 | coding | downstream | 215887 | 24233216 ~ 24288176 (-) |
| ccdc113 | ccdc113 | coding | downstream | 377435 | 24119224 ~ 24126628 (-) |
| LOC118948024 | NA | coding | downstream | 401139 | 24091604 ~ 24102924 (-) |
| LOC110514811 | ccl8 | coding | upstream | 46239 | 24552392 ~ 24554074 (-) |
| ciapin1 | LOC106573658 | coding | upstream | 89932 | 24596085 ~ 24611535 (-) |
| gbrl2 | gbrl2 | coding | upstream | 191534 | 24697687 ~ 24711462 (-) |
| cdk10 | cdk10 | coding | upstream | 302419 | 24808572 ~ 24819243 (-) |
| znf276 | znf276 | coding | upstream | 347671 | 24853824 ~ 24865158 (-) |
| G24685 | NA | non-coding | downstream | 52974 | 24450729 ~ 24451089 (-) |
| G24680 | NA | non-coding | downstream | 62226 | 24441592 ~ 24441837 (-) |
| G24679 | NA | non-coding | downstream | 63020 | 24440822 ~ 24441043 (-) |
| G24675 | NA | non-coding | downstream | 77413 | 24426323 ~ 24426650 (-) |
| G24672 | NA | non-coding | downstream | 86554 | 24416953 ~ 24417509 (-) |
| G24751 | NA | non-coding | upstream | 21466 | 24527619 ~ 24527903 (-) |
| G24754 | NA | non-coding | upstream | 24649 | 24530802 ~ 24531013 (-) |
| G24756 | NA | non-coding | upstream | 26654 | 24532807 ~ 24533125 (-) |
| G24757 | NA | non-coding | upstream | 27189 | 24533342 ~ 24533611 (-) |
| G24758 | NA | non-coding | upstream | 27739 | 24533892 ~ 24534269 (-) |
| G24542 | NA | other | downstream | 277573 | 24222907 ~ 24226490 (-) |
| LOC110511130 | LOC106573631 | other | downstream | 677572 | 23821656 ~ 23861029 (-) |
| G23394 | NA | other | downstream | 879714 | 23624026 ~ 23624349 (-) |
| G22350 | LOC106573623 | other | downstream | 1660758 | 22839845 ~ 22843305 (-) |
| G21993 | NA | other | downstream | 2121855 | 22381870 ~ 22382208 (-) |
| LOC118956210 | NA | other | upstream | 422195 | 24910984 ~ 24938701 (-) |
| LOC110518671 | klhl36 | other | upstream | 438755 | 24944908 ~ 24972465 (-) |
| G25115 | zfpm1 | other | upstream | 774439 | 25280592 ~ 25281030 (-) |
