G24882


Basic Information

Item Value
gene id G24882
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 24794487 ~ 24796348 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU28687
TTTTTTTTTATTATGCTGTTCTGAACCAGCTTTCTTTCCATTGCAATGACAGACATCAAATCCATTTGTTACAGTTGTACATTAACATGTTTCATTCTTATAgatatttacattttagattatTACATTACATCTTAATACAGGCTTGGAAGTCTAAAATACTTTGCATATAACAGGTTTGCAGCAGCAGGGTTTCTCCTGTGCTTTCTCTGCTAAATGATTGTGTGGAACGCAAGCTGCCACATGTAACTTTGGTTAAAAACCCTTTCTCAAAAATAAGCTTTTCTTTGCAATAACAGTATATAGCTTAAAACTAACAACCAAAAGAGAAAGATATGACAGTTTGACAATGTGAAATGCTAATTAAGATACATTCATGGGTAAATTAAGGTGGCGATCAAGCTAGAAATTGAACAGTTCAGGTATTGATAAAAATGTCCATTATTAGAAGTAGGCCTACAGAGACTGAATTGGGATAGAGTTCAGTCATACAATTGGCAGCATCCACTAGGCCCCACTTACAGTATCCGCTTACACACTGAGACAAGCTGTTAGGGTGATCACGTGGTAGAGCAGGGTCTGAAAAAGAGCTTTGACATATGTAGGACTCAAGAGGTCACATACAGCAAGATGATAAGCTTATACAGggataaaacaaaataaaagaaTAGCATCCCATTTGTGCTAGTAAACACATCCAAAGCTTTCTTTCACTAAATGGACATGATGAGGTACCATATTACAGCTGAAATGGTGTTTTCTCAGATATCATAGTGCTGAATGAACATCTTTGAACGTTCTTTATAGGTATATATTTCGCTTATTTTAATCATGTACTGGATGGAAACATTCCCCAGAACACTTAGCAGACAGCTTGTAGCTCAGTGACTTTACTGTGGATGCCTATTGACAGTAAATATTatgtttacatggtgtgtatgCAACACTTCCTCAGGAATCACAGAAAAATATGAGCTTTAATAGAAAGCATTGGCTTAGGGCTAATGCAGAAGGGAATGATAAAGGGAAGTGGTGTTCTCAGGCAGCATAGGACAATGGTTTGGCAGTGTGACTAGCCTACTGGAGGGCAGGTTGACTTTGAGGCAGGTGACAGGGGTCACTGGCGCTATGCCATGCTTTTGCTAATGCTCAAAAACAGCATCACATTTTCATAGTCAAGTCATGCTAAACATAGGATATACATACAAAATAATTAACTGAAAAACAGTCTGGAAATAGCATGTTAACAGTATAAGAATAATACTATTGCTGTGCATGTTGTTGAAAGCTTACTTTGCTTTAAAACCTATTACcttttgaaaataaaaaatacttttacACACACTAAAAATAGCATTTATGACTACATGTAACAAGGCACAGTTGGCAATACTGATTATAACAGTCATTTTGGATAATGTGCTAGATAATCAGTTTTTGGGTAACAGGCACTCTATAAAGCCAACAGAAATGCAAAAGTATAAACCCATTCATTCTGGCAGTATGCTCTAGGCCACTCACACGCAGTCATCAACTTGGAAACCCAATTGACACATGCTCATATGAACAAACTCGTACTCGTGTACTCGTGTTCATCACAAAATCACTCATTTGCCTGACAAGAACAGAGTACATACATAAAAAATTGCCAAAAGTACATTGGAAGGCTGTGTTGAATGATACATAGTAAAAATAAGAATATTTATGGATATGTTCCCGACTTCAGCCTCTTCCCATTTCACGTCAGCAGGCCCAGACGAGTCAGTTTGGCAGACAGGAAGgaatgaagaacaaacaccatggGCTTGGGGCCAGAGTGCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28687 True 1822 lncRNA 0.35 2 24794487 24796348

Neighbor

gene id symbol gene type direction distance location
gbrl2 gbrl2 coding downstream 83025 24697687 ~ 24711462 (-)
ciapin1 LOC106573658 coding downstream 182952 24596085 ~ 24611535 (-)
LOC110514811 ccl8 coding downstream 240413 24552392 ~ 24554074 (-)
LOC110513914 LOC106573648 coding downstream 383877 24408045 ~ 24410610 (-)
LOC110513605 LOC106573647 coding downstream 451331 24297698 ~ 24343156 (-)
cdk10 cdk10 coding upstream 12224 24808572 ~ 24819243 (-)
znf276 znf276 coding upstream 57476 24853824 ~ 24865158 (-)
LOC110517792 LOC106573801 coding upstream 102563 24898911 ~ 24905644 (-)
LOC118956210 NA coding upstream 114636 24910984 ~ 24938701 (-)
LOC110518671 klhl36 coding upstream 153486 24944908 ~ 24972465 (-)
G24871 NA non-coding downstream 19187 24771916 ~ 24775300 (-)
G24844 NA non-coding downstream 65705 24728551 ~ 24728782 (-)
G24842 NA non-coding downstream 69950 24724273 ~ 24724537 (-)
G24718 NA non-coding downstream 126983 24666624 ~ 24667504 (-)
G24782 NA non-coding downstream 210673 24583495 ~ 24583814 (-)
G24896 NA non-coding upstream 25329 24821677 ~ 24822128 (-)
G24851 NA non-coding upstream 35044 24831392 ~ 24834589 (-)
G24915 NA non-coding upstream 59043 24855391 ~ 24855619 (-)
G24917 NA non-coding upstream 60898 24857246 ~ 24857546 (-)
G24940 NA non-coding upstream 100424 24896772 ~ 24896987 (-)
G24542 NA other downstream 567997 24222907 ~ 24226490 (-)
LOC110511130 LOC106573631 other downstream 967996 23821656 ~ 23861029 (-)
G23394 NA other downstream 1170138 23624026 ~ 23624349 (-)
G22350 LOC106573623 other downstream 1951182 22839845 ~ 22843305 (-)
G25115 zfpm1 other upstream 484244 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 485256 25281604 ~ 25282018 (-)

Expression


Co-expression Network