G24979



Basic Information


Item Value
gene id G24979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 24946680 ~ 24952340 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU28821
ctcaggtcttttgcagaatccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttttgcaatataggactgattgttgtcctatggacagatcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcatgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggcgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU28821 True 855 lncRNA 0.41 2 24946680 24952340

Neighbor


gene id symbol gene type direction distance location
LOC118956210 NA coding downstream 33985 24910984 ~ 24938701 (-)
LOC110517792 LOC106573801 coding downstream 41036 24898911 ~ 24905644 (-)
znf276 znf276 coding downstream 81522 24853824 ~ 24865158 (-)
cdk10 cdk10 coding downstream 127437 24808572 ~ 24819243 (-)
gbrl2 gbrl2 coding downstream 235218 24697687 ~ 24711462 (-)
LOC118956655 NA coding upstream 59841 25012181 ~ 25020388 (-)
LOC110519016 LOC106573687 coding upstream 92105 25044445 ~ 25083238 (-)
LOC110519226 LOC106573688 coding upstream 136956 25089296 ~ 25112992 (-)
kiaa0513 kiaa0513 coding upstream 202385 25154725 ~ 25172586 (-)
LOC110519951 LOC106573692 coding upstream 420490 25372830 ~ 25381869 (-)
G24942 NA non-coding downstream 48853 24897610 ~ 24897827 (-)
G24940 NA non-coding downstream 49693 24896772 ~ 24896987 (-)
G24917 NA non-coding downstream 89134 24857246 ~ 24857546 (-)
G24915 NA non-coding downstream 91061 24855391 ~ 24855619 (-)
G24985 NA non-coding upstream 7676 24960016 ~ 24965492 (-)
G24959 NA non-coding upstream 46206 24998546 ~ 24999010 (-)
G24945 NA non-coding upstream 89220 25041560 ~ 25042769 (-)
G24948 NA non-coding upstream 90563 25042903 ~ 25044176 (-)
G25011 NA non-coding upstream 113550 25065890 ~ 25066926 (-)
LOC110514811 ccl8 other downstream 393118 24552392 ~ 24554074 (-)
G24542 NA other downstream 720190 24222907 ~ 24226490 (-)
LOC110511130 LOC106573631 other downstream 1120189 23821656 ~ 23861029 (-)
G25115 zfpm1 other upstream 328252 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 329264 25281604 ~ 25282018 (-)
LOC110520292 gnao1 other upstream 2683748 27631001 ~ 27781768 (-)
G28870 NA other upstream 3105103 28057443 ~ 28066305 (-)
G29355 NA other upstream 3751547 28703887 ~ 28704356 (-)

Expression



Co-expression Network