G24945


Basic Information

Item Value
gene id G24945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25041560 ~ 25042769 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU28757
tatttatatatatattccctGTTGACATTTTAAAAGCAGACATTTCAGGAGCTCTGCTCTGCGGTTGCAACATCCATTAAAAGGAAAACATGTTTGTACATAACTCCCATATTTAATAGAATGGTTGTGCAGTAGGTGGTCTGAGACTGCCTTGTATTTATGATTTCTCTCTTCATATCCCGTTTTTCTGCCTCCCCTAATTTTGTCATATACCTTTTTTTTCACTTTCTAGGCAATTTATCCATAATCCATGTTGTGGCTTCAACAGAGGCCCCATGTGCACCTTGCATCAACCTCTCAATGTTGCCTTTTTGGCATGATGGGGCATGTTTTTATAGAGATTAATATTAGACACTTTTTGCTAGTGGATGTAGATATACAGGCCATGGTCATCCTTAATGGGATAGGAATATTTTGTCATTGTCAGGAGTGAAGAGGCTCTGTAGAGGCAACAGCATGGTGTGTAGATGACCCTGATAAAAAAAGGGGCACATTAACTGCCCAAAGTGTCTAGACTAAGATTTTAATTCACAATTGTTTGCCATACTGTACTTCAAAAAAGAAACTATTGCATCAAACATCAGTACTGTCTGAAACGTGACATAACGGTTGATTCTAATGTGCTAATCATTCATTCACAGAACCACATTTCTCTCTACTCCCCATCAAGCATGGCGAGAGGACACTGTTTGGAGCATCCTCACCCAGGAAAGTAGTACATGTATCTCGGTTAAAATGTTTTGCATTCAATCTTTATTTGAAACCCTAAGAACACTTTCTGTTTACATGGGCATACTGTGGACAAGTCCACTTTTTTAAACCACCTGTTTTGAATTGATTTGCCATATTGTTACCAAGGAATGTTATTTCAGCATTCAGGTATGTGACTTTGCCCACACAAACAGCAGAACAGTGTTGTCCTCTGTGTCACTTCTCTTCTGCTGTAGGTGGCTTTGATCAATCTGTCCCTTCTCTGTGCCCTTTCAGGGTCTTACACAATCAGATTGTTCTTTTGACTGCCCTACTCTGGTCCCATCCACTTCTTGTTTTTTCAGAATTCTCTAGAATTCTGTTCAGTTTTGGCAGAACTTAAATAACACAGAGTTGGACACCGTCCAATAAGAGTTCAATGCTATGTTTATTTTGAGTGCCATTACGGTTACTGGCACTACATTTCATCTGGCTTAGGACCTCATGCTGTCACTtcctg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU28757 True 1210 lncRNA 0.40 1 25041560 25042769

Neighbor

gene id symbol gene type direction distance location
LOC118956655 NA coding downstream 21172 25012181 ~ 25020388 (-)
LOC110518671 klhl36 coding downstream 88246 24944908 ~ 24972465 (-)
LOC118956210 NA coding downstream 128865 24910984 ~ 24938701 (-)
LOC110517792 LOC106573801 coding downstream 135916 24898911 ~ 24905644 (-)
znf276 znf276 coding downstream 176402 24853824 ~ 24865158 (-)
LOC110519016 LOC106573687 coding upstream 1676 25044445 ~ 25083238 (-)
LOC110519226 LOC106573688 coding upstream 46527 25089296 ~ 25112992 (-)
kiaa0513 kiaa0513 coding upstream 111956 25154725 ~ 25172586 (-)
LOC110519951 LOC106573692 coding upstream 330061 25372830 ~ 25381869 (-)
LOC118959932 chtf8 coding upstream 416973 25459742 ~ 25463093 (-)
G24959 NA non-coding downstream 42550 24998546 ~ 24999010 (-)
G24985 NA non-coding downstream 76068 24960016 ~ 24965492 (-)
G24972 NA non-coding downstream 78826 24918667 ~ 24962734 (-)
G24979 NA non-coding downstream 89220 24946680 ~ 24952340 (-)
G24948 NA non-coding upstream 134 25042903 ~ 25044176 (-)
G25011 NA non-coding upstream 23121 25065890 ~ 25066926 (-)
G24952 NA non-coding upstream 43305 25086074 ~ 25087355 (-)
G24954 NA non-coding upstream 45893 25088662 ~ 25089255 (-)
LOC110514811 ccl8 other downstream 487998 24552392 ~ 24554074 (-)
G24542 NA other downstream 815070 24222907 ~ 24226490 (-)
G25115 zfpm1 other upstream 237823 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 238835 25281604 ~ 25282018 (-)
LOC110520292 gnao1 other upstream 2593319 27631001 ~ 27781768 (-)
G28870 NA other upstream 3014674 28057443 ~ 28066305 (-)
G29355 NA other upstream 3661118 28703887 ~ 28704356 (-)

Expression


Co-expression Network