G25011



Basic Information


Item Value
gene id G25011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25065890 ~ 25066926 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU28853
aaacatttgaccctctgtcatggccaacaaagggtatataacaaagtattgagaaacttttgttattgaccaaatacttattttccacaataatttgcaaataaattcataaaatagacctatatctatcctaccctgcctttctagagggggatgaccacTGAAGCTTTCAAATCTTTAGGGatttcagacgatacgaaag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU28853 True 202 lncRNA 0.35 2 25065890 25066926

Neighbor


gene id symbol gene type direction distance location
LOC118956655 NA coding downstream 45502 25012181 ~ 25020388 (-)
LOC110518671 klhl36 coding downstream 112576 24944908 ~ 24972465 (-)
LOC118956210 NA coding downstream 153195 24910984 ~ 24938701 (-)
LOC110517792 LOC106573801 coding downstream 160246 24898911 ~ 24905644 (-)
znf276 znf276 coding downstream 200732 24853824 ~ 24865158 (-)
LOC110519226 LOC106573688 coding upstream 22370 25089296 ~ 25112992 (-)
kiaa0513 kiaa0513 coding upstream 87799 25154725 ~ 25172586 (-)
LOC110519951 LOC106573692 coding upstream 305904 25372830 ~ 25381869 (-)
LOC118959932 chtf8 coding upstream 392816 25459742 ~ 25463093 (-)
LOC110520001 wfdc1 coding upstream 406610 25473536 ~ 25485212 (-)
G24948 NA non-coding downstream 21714 25042903 ~ 25044176 (-)
G24945 NA non-coding downstream 23121 25041560 ~ 25042769 (-)
G24959 NA non-coding downstream 66880 24998546 ~ 24999010 (-)
G24985 NA non-coding downstream 100398 24960016 ~ 24965492 (-)
G24952 NA non-coding upstream 19148 25086074 ~ 25087355 (-)
G24954 NA non-coding upstream 21736 25088662 ~ 25089255 (-)
G25026 NA non-coding upstream 47004 25113930 ~ 25114287 (-)
G25030 NA non-coding upstream 57076 25124002 ~ 25124227 (-)
LOC110514811 ccl8 other downstream 512328 24552392 ~ 24554074 (-)
G24542 NA other downstream 839400 24222907 ~ 24226490 (-)
G25115 zfpm1 other upstream 213666 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 214678 25281604 ~ 25282018 (-)
LOC110520292 gnao1 other upstream 2569162 27631001 ~ 27781768 (-)
G28870 NA other upstream 2990517 28057443 ~ 28066305 (-)
G29355 NA other upstream 3636961 28703887 ~ 28704356 (-)

Expression



Co-expression Network