G24954



Basic Information


Item Value
gene id G24954
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25088662 ~ 25089255 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU28772
aattgagacatggattgtgtatgtgtgccattcagagggtgaatgggcaagacaaaggatttaagtgcttttgaacagggtgtggtagtaggtgccaggcacaccggtttgagtgggtcgagaactgcaacactgctgggtttttcacactcaacagtttccagccTATCAAGAATGGTCGACCAccgaaaggacatccagccaacttgacacaactgtgggaagcattggcgtcaacatgtgCCAGGGTCTCTGTGAAATGCTTTCCACAACTTGTAgttcatgccctgacgaattgagggtgttctgaaggcaaaagggggtgcaactcaatattaggtgttcctaatgttttgtgcactgtgtgtgtgtgtatatataaacggTACTGTATCCTAAGTGAAATCTCTTCATGACATGAATGTAAGGCTGAGTTAAGCATTTTCCTGCAGTGCCATTGGTTTCTCTTTAACCAAGCACTCCAGGAACAGTGTGGGTCAGAAATAGATGTAGAGTTACTAGTGTCACTCTTAAAGTTGCTGCATGGTCAATCCAACatctgcattggccatgcagcatttacggtgatacGGC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU28772 True 594 lncRNA 0.45 1 25088662 25089255

Neighbor


gene id symbol gene type direction distance location
LOC110519016 LOC106573687 coding downstream 5424 25044445 ~ 25083238 (-)
LOC118956655 NA coding downstream 68274 25012181 ~ 25020388 (-)
LOC110518671 klhl36 coding downstream 135348 24944908 ~ 24972465 (-)
LOC118956210 NA coding downstream 175967 24910984 ~ 24938701 (-)
LOC110517792 LOC106573801 coding downstream 183018 24898911 ~ 24905644 (-)
LOC110519226 LOC106573688 coding upstream 41 25089296 ~ 25112992 (-)
kiaa0513 kiaa0513 coding upstream 65470 25154725 ~ 25172586 (-)
LOC110519951 LOC106573692 coding upstream 283575 25372830 ~ 25381869 (-)
LOC118959932 chtf8 coding upstream 370487 25459742 ~ 25463093 (-)
LOC110520001 wfdc1 coding upstream 384281 25473536 ~ 25485212 (-)
G24952 NA non-coding downstream 1307 25086074 ~ 25087355 (-)
G25011 NA non-coding downstream 21736 25065890 ~ 25066926 (-)
G24948 NA non-coding downstream 44486 25042903 ~ 25044176 (-)
G24945 NA non-coding downstream 45893 25041560 ~ 25042769 (-)
G24959 NA non-coding downstream 89652 24998546 ~ 24999010 (-)
G25026 NA non-coding upstream 24675 25113930 ~ 25114287 (-)
G25030 NA non-coding upstream 34747 25124002 ~ 25124227 (-)
G24957 NA non-coding upstream 49130 25138385 ~ 25140692 (-)
G24955 NA non-coding upstream 65011 25154266 ~ 25154474 (-)
znf276 znf276 other downstream 223828 24853824 ~ 24865158 (-)
LOC110514811 ccl8 other downstream 535100 24552392 ~ 24554074 (-)
G24542 NA other downstream 862172 24222907 ~ 24226490 (-)
G25115 zfpm1 other upstream 191337 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 192349 25281604 ~ 25282018 (-)
LOC110520292 gnao1 other upstream 2546833 27631001 ~ 27781768 (-)
G28870 NA other upstream 2968188 28057443 ~ 28066305 (-)
G29355 NA other upstream 3614632 28703887 ~ 28704356 (-)

Expression



Co-expression Network