G24957


Basic Information

Item Value
gene id G24957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25138385 ~ 25140692 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU28775
GTTGTGTGCCAGGAAACAACTTGATTAGCAGCTAATGCTCCTTGCAGCGAGCCCATCAATCTTCATCACGGCCGCCCATACCCTTGTGCTGAGTATGTATTTGGACAAGTGTAGTTGGTATATGTAGAGAGTGAACAATATAATAAACATGTAGATTAAAACCCTTTTGAACCTAGCGGTTTTAAATTGAGATCTGATTGTTCATGAAAGGGATGACACTTTCCTATACAAGCTATATTTCTCTCACTGTTTATTTGAACCCACGCTGATTCATCAAGCCTTGTCAACTCAATCTCAAACGAGTTATGGTGAGGAGATTCAACTTCGATTCATAGAGCTATGAGTGTGAACCACACCCTTAAACCTACATTACGATATATGCCTCATTACCCCACCATTCACCAATAAAAATCATTTCATCCACCCATATATCTTCCCTGACAGCCCTCCATTTGACTACTGCGGCCTTGTCCCACGGAATGATGTCATGGAGTCTCTTCCTCGTAGGTGGTCTGGCAATTGGTTAGAGGAAACAGAGTAGCCAACAGTTGATTTTAGGGGTTACTGAATCCACACGATTCAGTGAGCTTACCTGATTACCTACAGTTTGGGTCTTGAGAAAGAAATTGACAGTCATTGGTGTTTCAGTCTAACATTGTGCACTATTGCAATTGGTCTAGTTGGTAGTAGAGTAGATCGGAAATATCACACCGGCAACACAGCATTCATCTCATTGAAGAGAAAAGTTATTGACGCAGAGAGCTTTCAGATTTGTTTCCCATGAAAATAGATAAGAATGAGAGGACTACATATTAGTGCTGGAGCCTAAATGTGGATCATGTTTTAAATCAAACACTTAGAGGGGTCAACAGATCATGCATTTGTGTGCCTTAGAAAGAGAGACCAGAGTGTTGAACAGTTGAGCTAGTGGGTGGCACTAGAACATTCAGCCATCTTGTTATGTTTGTCTCAAGAGCACCACTCTCTACAATTAACCAACGTTTCAGTTGTTGGTTGAGGAGTTTGCTCTAGAGAGACTAGAAATTATTTGTAATATATGCTGATCATAAGGCTTAGAAATCATTATGTTAGAGAGTGGTATCTCAGACCAGTAGAAGTGTGTTTAGATGTGAACTGAAATTGGTTTTCAATCATTTACTTAGTCACAATATTTAAATTAGAATAATATTGAGAAGGAAGATTGCCATATTTTAATCAAATGCATAACACTCAGGAAAATTATCAATTTTGTGTGCAACACATTTAATCAAAGAAATTCTTTCAAATATTATGTTGTTTCAGATGCTTAATTATTGTTTGTTTATGATCGTCAGTTTTACAGAAGGGCCTACAGAATTTGTCCATAGAGCTGAAGCCTAAATGGGCTGATGACCAATTGAGCTGAGCAGGCTAGGGAATGCAAACTCTTTTTCTCCTCTGAGGTTTTCAGCATGAGGTTTTATTTACACATCTGACCAAAATAATCCTATACACAGGAAATTCTTGTGGTTGTGAGTTCCTCTCCTCAAATGTTGGGAAGTTTATTTATTTCTACAGGCATTCCTGGTTTGCTCTCTCAAAGTCTACAGTGAAGGTTTCAGAGGAATATAAATGTAAGCTATATTTAGAAGTCAGAGTTTTTTTGTCATATATTTCATGATTATGTTGTCAATAATGCTCTGATTTCATGCAGGTGTCATAGAAACCCCTACAAACCCACTGCTTATTTATACAGTATGAAACTTTACAGTTCAATACCATAACAACTTTCATTCACTGTAAATCACATGTGGCCTCAAGGAAACAGATGGCAATGCTCTGGTTGATTCAGTATTTGTGTTAACAGCACTTTTTGCAATGGGGAATTTGTTTAACTGATAAACAAATGAATGTTTACTCGTGCCCATAGCTCTAATCCTGGTGTAGTATGCAGTGCAGGGTTATTAAAAATGTTTCACTTTTCCCTTCAGAATTTTGGTTTATTATTCCAAGGTGTAAATCTGTTTGAGGAAGAACATTGAAAACCAGCTGCAGGACTATATTTAAGCAACAAGGCCCGGGGGGGtgtggtaaatggccaatataACACTGCTAAAAGCTGTTCTTATGTACAACACAACACGGAGTACCTGGATACAGGTGCCCTGAGGCATCTTATTGCTACTATAAACTAGTTTCCAGGGtgattagagcagtaaaaatacatgttttgtcatacctgacctgtggtatatggtctgatataccatggctttcagcaaatcagcattcagggctcgaaccacccagtttataatagagTACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28775 True 2308 lncRNA 0.38 1 25138385 25140692

Neighbor

gene id symbol gene type direction distance location
LOC110519226 LOC106573688 coding downstream 26154 25089296 ~ 25112992 (-)
LOC110519016 LOC106573687 coding downstream 55147 25044445 ~ 25083238 (-)
LOC118956655 NA coding downstream 117997 25012181 ~ 25020388 (-)
LOC110518671 klhl36 coding downstream 185071 24944908 ~ 24972465 (-)
LOC118956210 NA coding downstream 225690 24910984 ~ 24938701 (-)
kiaa0513 kiaa0513 coding upstream 14033 25154725 ~ 25172586 (-)
LOC110519951 LOC106573692 coding upstream 232138 25372830 ~ 25381869 (-)
LOC118959932 chtf8 coding upstream 319050 25459742 ~ 25463093 (-)
LOC110520001 wfdc1 coding upstream 332844 25473536 ~ 25485212 (-)
LOC110520008 kcng4 coding upstream 396423 25537115 ~ 25566593 (-)
G25030 NA non-coding downstream 14158 25124002 ~ 25124227 (-)
G25026 NA non-coding downstream 24098 25113930 ~ 25114287 (-)
G24954 NA non-coding downstream 49130 25088662 ~ 25089255 (-)
G24952 NA non-coding downstream 51030 25086074 ~ 25087355 (-)
G24955 NA non-coding upstream 13574 25154266 ~ 25154474 (-)
G25036 NA non-coding upstream 19090 25159782 ~ 25160386 (-)
G25037 NA non-coding upstream 28589 25169281 ~ 25169516 (-)
G25040 NA non-coding upstream 35821 25176513 ~ 25176748 (-)
znf276 znf276 other downstream 273551 24853824 ~ 24865158 (-)
LOC110514811 ccl8 other downstream 584823 24552392 ~ 24554074 (-)
G24542 NA other downstream 911895 24222907 ~ 24226490 (-)
G25115 zfpm1 other upstream 139900 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 140912 25281604 ~ 25282018 (-)
LOC110520292 gnao1 other upstream 2495396 27631001 ~ 27781768 (-)
G28870 NA other upstream 2916751 28057443 ~ 28066305 (-)
G29355 NA other upstream 3563195 28703887 ~ 28704356 (-)

Expression


Co-expression Network