G25042



Basic Information


Item Value
gene id G25042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25178355 ~ 25178673 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU28884
tgtcatgacgttggcctgggggtaggtttatgaaagtcataaatacctcttcccccctttttcctctctctaccctactgatgttacatttgcaaaccccttagttaacatagagattctgggaacatcagaaggtggggggaaattaactatattctggtaatccgaccaattgaacatatacGGTGGTActtaatgtatatacagtatgtcagtttggttgtcatctgagacattctcatcaatgataagatgacataaactctacagtggaaagtctacacatcagagttatcggattcacatggaattgttgttc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU28884 True 319 lncRNA 0.49 1 25178355 25178673

Neighbor


gene id symbol gene type direction distance location
kiaa0513 kiaa0513 coding downstream 5769 25154725 ~ 25172586 (-)
LOC110519226 LOC106573688 coding downstream 66124 25089296 ~ 25112992 (-)
LOC110519016 LOC106573687 coding downstream 95117 25044445 ~ 25083238 (-)
LOC118956655 NA coding downstream 157967 25012181 ~ 25020388 (-)
LOC110518671 klhl36 coding downstream 225041 24944908 ~ 24972465 (-)
LOC110519951 LOC106573692 coding upstream 194157 25372830 ~ 25381869 (-)
LOC118959932 chtf8 coding upstream 281069 25459742 ~ 25463093 (-)
LOC110520001 wfdc1 coding upstream 294863 25473536 ~ 25485212 (-)
LOC110520008 kcng4 coding upstream 358442 25537115 ~ 25566593 (-)
LOC110520015 LOC106573699 coding upstream 501236 25679909 ~ 25712438 (-)
G25040 NA non-coding downstream 1607 25176513 ~ 25176748 (-)
G25037 NA non-coding downstream 8839 25169281 ~ 25169516 (-)
G25036 NA non-coding downstream 17969 25159782 ~ 25160386 (-)
G24955 NA non-coding downstream 23881 25154266 ~ 25154474 (-)
G25110 NA non-coding upstream 94869 25273542 ~ 25273769 (-)
G25114 NA non-coding upstream 99792 25278465 ~ 25278687 (-)
G25118 NA non-coding upstream 103452 25282125 ~ 25282666 (-)
G25120 zfpm1 non-coding upstream 104850 25283523 ~ 25287060 (-)
G25119 NA non-coding upstream 108814 25287487 ~ 25288484 (-)
LOC118956210 NA other downstream 239654 24910984 ~ 24938701 (-)
znf276 znf276 other downstream 313521 24853824 ~ 24865158 (-)
LOC110514811 ccl8 other downstream 624793 24552392 ~ 24554074 (-)
G24542 NA other downstream 951865 24222907 ~ 24226490 (-)
G25115 zfpm1 other upstream 101919 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 102931 25281604 ~ 25282018 (-)
LOC110520292 gnao1 other upstream 2457415 27631001 ~ 27781768 (-)
G28870 NA other upstream 2878770 28057443 ~ 28066305 (-)
G29355 NA other upstream 3525214 28703887 ~ 28704356 (-)

Expression



Co-expression Network