G25171



Basic Information


Item Value
gene id G25171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25335289 ~ 25335509 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU29019
gttttccccagtgtatttatccctgtgtttcctgtctctctgtgccagttcgtatgttttccaagtcaaccagcgtttttcccattctcctgcctttgctattctccttttctATTccacctggttttgacccttgcctgtttctggactctgtacccgcctgtctgaccattctgcctgccttgacctcgagcctgtctgccactctgtacctcctggac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU29019 True 221 lncRNA 0.50 1 25335289 25335509

Neighbor


gene id symbol gene type direction distance location
kiaa0513 kiaa0513 coding downstream 162703 25154725 ~ 25172586 (-)
LOC110519226 LOC106573688 coding downstream 223058 25089296 ~ 25112992 (-)
LOC110519016 LOC106573687 coding downstream 252051 25044445 ~ 25083238 (-)
LOC118956655 NA coding downstream 314901 25012181 ~ 25020388 (-)
LOC110518671 klhl36 coding downstream 381975 24944908 ~ 24972465 (-)
LOC110519951 LOC106573692 coding upstream 37321 25372830 ~ 25381869 (-)
LOC118959932 chtf8 coding upstream 124233 25459742 ~ 25463093 (-)
LOC110520001 wfdc1 coding upstream 138027 25473536 ~ 25485212 (-)
LOC110520008 kcng4 coding upstream 201606 25537115 ~ 25566593 (-)
LOC110520015 LOC106573699 coding upstream 344400 25679909 ~ 25712438 (-)
G25163 NA non-coding downstream 6629 25328012 ~ 25328660 (-)
G25161 NA non-coding downstream 8321 25326687 ~ 25326968 (-)
G25155 NA non-coding downstream 16152 25318840 ~ 25319137 (-)
G25148 NA non-coding downstream 23917 25311036 ~ 25311372 (-)
G25145 NA non-coding downstream 26180 25308717 ~ 25309109 (-)
G25181 NA non-coding upstream 9121 25344630 ~ 25345013 (-)
G25236 NA non-coding upstream 30617 25366126 ~ 25366573 (-)
G25263 NA non-coding upstream 78461 25413970 ~ 25414244 (-)
G25266 NA non-coding upstream 81062 25416571 ~ 25416858 (-)
G25117 zfpm1 other downstream 53271 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 54259 25280592 ~ 25281030 (-)
LOC118956210 NA other downstream 396588 24910984 ~ 24938701 (-)
znf276 znf276 other downstream 470455 24853824 ~ 24865158 (-)
LOC110520292 gnao1 other upstream 2300579 27631001 ~ 27781768 (-)
G28870 NA other upstream 2721934 28057443 ~ 28066305 (-)
G29355 NA other upstream 3368378 28703887 ~ 28704356 (-)
G29906 mef2a other upstream 3944767 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 5796384 31131151 ~ 31132900 (-)

Expression



Co-expression Network