G25182


Basic Information

Item Value
gene id G25182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25346151 ~ 25346666 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU29030
gagacttgggcggccagggtctcaacggcatgtcgagcagcagacacttcctgctcgtgtctgcctagcatcgctccctggatctcgacggcagagtggagaggatccgaagtcgctgggtccattcttggtcggattcttctgttacggtgcgtgaatgaggacccaaaagcgaattaacttaaacagagcttctttaataacaaaacaaacgtaggctcagatggaccggcagattccgacaggacaggacaaggttgcagcaaacatgacgatagtctggttcaggcatgaataacacaaacaagaatccgacaaagacaggaacaaaaacagagagagatatagaggactaatcagagggaaaaagggaacaggtgggaaaaggggtgacgaggtagttaggaggagacaaggaacagctgggggaaagagggggagaaaaggtaacctaataacgaccagcagagggagacagggtgaagggaaaggacagaaacaagacacaacatgaca

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29030 True 516 lncRNA 0.57 1 25346151 25346666

Neighbor

gene id symbol gene type direction distance location
LOC110519941 zfpm1 coding upstream 57663 25189509 ~ 25288488 (+)
LOC110520087 LOC106573690 coding upstream 158004 25186149 ~ 25188147 (+)
LOC110520053 NA coding upstream 162123 25181837 ~ 25184028 (+)
LOC110519532 LOC106573802 coding upstream 207894 25136452 ~ 25138257 (+)
plcg2 plcg2 coding upstream 305939 25019010 ~ 25040212 (+)
zc3h18 LOC106573693 coding downstream 35855 25382521 ~ 25409953 (+)
il17c1 il17c1 coding downstream 65066 25411732 ~ 25413325 (+)
LOC110519986 LOC106573695 coding downstream 102190 25448856 ~ 25458271 (+)
LOC110519996 LOC106573694 coding downstream 116434 25463100 ~ 25473427 (+)
LOC118945804 NA coding downstream 144869 25491535 ~ 25502970 (+)
G25180 LOC107756720 non-coding upstream 1192 25344455 ~ 25344959 (+)
G25169 NA non-coding upstream 11684 25334244 ~ 25334467 (+)
G25150 NA non-coding upstream 32187 25313600 ~ 25313964 (+)
G25149 NA non-coding upstream 33929 25312007 ~ 25312222 (+)
G25126 NA non-coding upstream 52218 25293492 ~ 25293933 (+)
G25194 NA non-coding downstream 13487 25360153 ~ 25360434 (+)
G25264 NA non-coding downstream 67806 25414472 ~ 25414784 (+)
G25274 NA non-coding downstream 74614 25421280 ~ 25421536 (+)
G25277 NA non-coding downstream 78428 25425094 ~ 25425325 (+)
G25284 NA non-coding downstream 83449 25430115 ~ 25430355 (+)
G24365 kiaa0513 other upstream 177823 25167817 ~ 25168328 (+)
G24435 NA other upstream 234290 25111210 ~ 25111861 (+)
G24307 NA other upstream 488900 24856944 ~ 24857251 (+)
G24295 NA other upstream 505689 24839985 ~ 24840462 (+)
G24123 NA other upstream 793716 24550525 ~ 24552435 (+)
LOC110520022 LOC106573700 other downstream 365905 25712423 ~ 25732202 (+)
G26858 NA other downstream 1308631 26655297 ~ 26655598 (+)
si:ch211-216l23.2 LOC106573703 other downstream 1333625 26680211 ~ 26696018 (+)
G27553 NA other downstream 1967156 27257563 ~ 27316517 (+)

Expression


Co-expression Network