Gene
RNA
| Item | Value |
|---|---|
| gene id | G25395 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 25513458 ~ 25513689 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU29262 | True | 232 | lncRNA | 0.48 | 1 | 25513458 | 25513689 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520001 | wfdc1 | coding | downstream | 28246 | 25473536 ~ 25485212 (-) |
| LOC118959932 | chtf8 | coding | downstream | 50365 | 25459742 ~ 25463093 (-) |
| LOC110519951 | LOC106573692 | coding | downstream | 131602 | 25372830 ~ 25381869 (-) |
| kiaa0513 | kiaa0513 | coding | downstream | 340872 | 25154725 ~ 25172586 (-) |
| LOC110519226 | LOC106573688 | coding | downstream | 401227 | 25089296 ~ 25112992 (-) |
| LOC110520008 | kcng4 | coding | upstream | 23426 | 25537115 ~ 25566593 (-) |
| LOC110520015 | LOC106573699 | coding | upstream | 166220 | 25679909 ~ 25712438 (-) |
| LOC118966628 | NA | coding | upstream | 219266 | 25732955 ~ 25747219 (-) |
| LOC110520038 | LOC106573702 | coding | upstream | 381527 | 25895216 ~ 26501491 (-) |
| LOC110520062 | NA | coding | upstream | 1412609 | 26926298 ~ 26939324 (-) |
| G25390 | NA | non-coding | downstream | 2485 | 25510774 ~ 25510973 (-) |
| G25378 | NA | non-coding | downstream | 9968 | 25503184 ~ 25503490 (-) |
| G25351 | NA | non-coding | downstream | 51102 | 25462138 ~ 25462356 (-) |
| G25328 | NA | non-coding | downstream | 54515 | 25458683 ~ 25458943 (-) |
| G25325 | NA | non-coding | downstream | 56341 | 25456903 ~ 25457117 (-) |
| G26149 | NA | non-coding | upstream | 45338 | 25559027 ~ 25559340 (-) |
| G26164 | NA | non-coding | upstream | 70732 | 25584421 ~ 25584864 (-) |
| G26217 | NA | non-coding | upstream | 137369 | 25651058 ~ 25653395 (-) |
| G26230 | NA | non-coding | upstream | 153250 | 25666939 ~ 25667557 (-) |
| G26216 | LOC106573700 | non-coding | upstream | 198855 | 25712544 ~ 25732197 (-) |
| G25117 | zfpm1 | other | downstream | 231440 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 232428 | 25280592 ~ 25281030 (-) |
| LOC110518671 | klhl36 | other | downstream | 562071 | 24944908 ~ 24972465 (-) |
| LOC118956210 | NA | other | downstream | 574757 | 24910984 ~ 24938701 (-) |
| znf276 | znf276 | other | downstream | 648624 | 24853824 ~ 24865158 (-) |
| LOC110520292 | gnao1 | other | upstream | 2122399 | 27631001 ~ 27781768 (-) |
| G28870 | NA | other | upstream | 2543754 | 28057443 ~ 28066305 (-) |
| G29355 | NA | other | upstream | 3190198 | 28703887 ~ 28704356 (-) |
| G29906 | mef2a | other | upstream | 3766587 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 5618204 | 31131151 ~ 31132900 (-) |
