G26217


Basic Information

Item Value
gene id G26217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25651058 ~ 25653395 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU30122
tcagtttggccaggcagccagctctaggaagagtcttggtggttccaaacttcttccatttaagaatgatggaggccactgtgtttttcgagaccttcaatgctgcagaaatgttttggtacacttacccagatctctgcctcgacacaatcttgtctcggagctcaacAGACAATTTCTTTAAcctcatggtttttgctctgacatgcactgtctaccgtgggaccttatatagacaggtgtgttcctttccatatcatgtccaatcaattgaattgatgAGCCGGTttgggactccaatcaagttgtagaaacatctcaaggatgatcaatggaaacaggatgcacctgagcgcaattgacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgcctgactTATTGAGCACAGAGACAAATCGCAAAGGTGTCTCAGGCAGTTTTGAAGTATCTAAATATAGTGTAACCTACCAATCAATGTATGTCAAGTGCCGTGGAGGGCACAATCTTACAACGTTGCAGTCCAGAAATGAGAGCTTTACCATCTATGCCAAAAGCCCTGGCCTCTGATGGAGACTAGAACTGTCGTCAACGTATGCTTCagtatccctccttctctctagaAGCACTTGTGTGCACAGGCCCCATAGGCATATCAGAATGATCCCACCCTGGTCATCAATGTAGCTGACcaatgtagagagagacatttgCTTAAGCAGAATACAATCCAAAGCTTGTGTGGTCCAGAGGCAAGAACTCTACCATGTATGGAAAAGCCTGGGCTCCTGATGGGGACAATATAATTCTCACCACTGCATGTTACAATAGTCAAGTAATCTGTTTGTCACCTGTCAAACTGATTGTACCTTAAATTTAGTCTTCGAGATGCTCAAACAAGTGCGTGTATCTGTAGTTGGTGGTCTTAAACTCTAAAATGCACTAGACTGTGTAAGACAAAACccacaaacaaaaaacaacaggCAAATGCGTCAGAGCTAGTTCAAACTGCAGGACTTGGTGAATAGATCATGGGAGACAAAAGTGAGAGACAATGAATAAAGATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU30122 True 1136 lncRNA 0.45 2 25651058 25653395

Neighbor

gene id symbol gene type direction distance location
LOC110520008 kcng4 coding downstream 84465 25537115 ~ 25566593 (-)
LOC110520001 wfdc1 coding downstream 165846 25473536 ~ 25485212 (-)
LOC118959932 chtf8 coding downstream 187965 25459742 ~ 25463093 (-)
LOC110519951 LOC106573692 coding downstream 269202 25372830 ~ 25381869 (-)
kiaa0513 kiaa0513 coding downstream 478472 25154725 ~ 25172586 (-)
LOC110520015 LOC106573699 coding upstream 26514 25679909 ~ 25712438 (-)
LOC118966628 NA coding upstream 79560 25732955 ~ 25747219 (-)
LOC110520038 LOC106573702 coding upstream 241821 25895216 ~ 26501491 (-)
LOC110520062 NA coding upstream 1272903 26926298 ~ 26939324 (-)
LOC118966748 NA coding upstream 1489965 27143360 ~ 27143413 (-)
G26164 NA non-coding downstream 66194 25584421 ~ 25584864 (-)
G26149 NA non-coding downstream 91718 25559027 ~ 25559340 (-)
G25395 NA non-coding downstream 137369 25513458 ~ 25513689 (-)
G25390 NA non-coding downstream 140085 25510774 ~ 25510973 (-)
G25378 NA non-coding downstream 147568 25503184 ~ 25503490 (-)
G26230 NA non-coding upstream 13544 25666939 ~ 25667557 (-)
G26216 LOC106573700 non-coding upstream 59149 25712544 ~ 25732197 (-)
G26328 NA non-coding upstream 212849 25866244 ~ 25932705 (-)
G26538 NA non-coding upstream 544757 26198152 ~ 26245155 (-)
G26573 NA non-coding upstream 595452 26248847 ~ 26340716 (-)
G25117 zfpm1 other downstream 369040 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 370028 25280592 ~ 25281030 (-)
LOC110518671 klhl36 other downstream 699671 24944908 ~ 24972465 (-)
LOC118956210 NA other downstream 712357 24910984 ~ 24938701 (-)
znf276 znf276 other downstream 786224 24853824 ~ 24865158 (-)
LOC110520292 gnao1 other upstream 1982693 27631001 ~ 27781768 (-)
G28870 NA other upstream 2404048 28057443 ~ 28066305 (-)
G29355 NA other upstream 3050492 28703887 ~ 28704356 (-)
G29906 mef2a other upstream 3626881 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 5478498 31131151 ~ 31132900 (-)

Expression


Co-expression Network