G27222



Basic Information


Item Value
gene id G27222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 26924451 ~ 26924665 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU31177
ctgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacatttttttctcattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU31177 True 215 lncRNA 0.44 1 26924451 26924665

Neighbor


gene id symbol gene type direction distance location
LOC110520038 LOC106573702 coding downstream 422960 25895216 ~ 26501491 (-)
LOC118966628 NA coding downstream 1177232 25732955 ~ 25747219 (-)
LOC110520015 LOC106573699 coding downstream 1212013 25679909 ~ 25712438 (-)
LOC110520008 kcng4 coding downstream 1357858 25537115 ~ 25566593 (-)
LOC110520001 wfdc1 coding downstream 1439239 25473536 ~ 25485212 (-)
LOC110520062 NA coding upstream 1633 26926298 ~ 26939324 (-)
LOC118966748 NA coding upstream 218695 27143360 ~ 27143413 (-)
LOC110520098 LOC106573710 coding upstream 281246 27205911 ~ 27215251 (-)
LOC110532124 LOC104966864 coding upstream 301498 27226163 ~ 27299859 (-)
LOC110532131 aars coding upstream 392007 27316672 ~ 27321126 (-)
G27204 NA non-coding downstream 21405 26902829 ~ 26903046 (-)
G27124 LOC106573705 non-coding downstream 175689 26737669 ~ 26748762 (-)
G27076 LOC106562530 non-coding downstream 267879 26656353 ~ 26656572 (-)
G27073 NA non-coding downstream 273190 26651005 ~ 26651261 (-)
G27068 NA non-coding downstream 282308 26641935 ~ 26642143 (-)
G27257 NA non-coding upstream 15281 26939946 ~ 26940178 (-)
G27253 NA non-coding upstream 16644 26941309 ~ 26950750 (-)
G27271 NA non-coding upstream 31756 26956421 ~ 26956742 (-)
G27273 NA non-coding upstream 32252 26956917 ~ 26957213 (-)
G27294 NA non-coding upstream 49081 26973746 ~ 26973945 (-)
G25117 zfpm1 other downstream 1642433 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 1643421 25280592 ~ 25281030 (-)
LOC110518671 klhl36 other downstream 1973064 24944908 ~ 24972465 (-)
LOC118956210 NA other downstream 1985750 24910984 ~ 24938701 (-)
znf276 znf276 other downstream 2059617 24853824 ~ 24865158 (-)
LOC110520292 gnao1 other upstream 711423 27631001 ~ 27781768 (-)
G28870 NA other upstream 1132778 28057443 ~ 28066305 (-)
G29355 NA other upstream 1779222 28703887 ~ 28704356 (-)
G29906 mef2a other upstream 2355611 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 4207228 31131151 ~ 31132900 (-)

Expression



Co-expression Network