G27297



Basic Information


Item Value
gene id G27297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 26975979 ~ 26976214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU31273
gacctacgctaacttcctgtgcttaccggggggctagagagaccgggcaggcaccgtgttatgctgtggtgcgcacggtgtctccagtgcgggtgcatagcccggtgcggtacataccagctcctcgtatcggccgggctagagtgggcatcgagccaggtaaggttgggcaggctcggtgctcaagtgctccagtgcgcctgcacgttccggtctatccagtaccacctccacgc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU31273 True 236 lncRNA 0.32 1 26975979 26976214

Neighbor


gene id symbol gene type direction distance location
LOC110520062 NA coding downstream 36655 26926298 ~ 26939324 (-)
LOC110520038 LOC106573702 coding downstream 474488 25895216 ~ 26501491 (-)
LOC118966628 NA coding downstream 1228760 25732955 ~ 25747219 (-)
LOC110520015 LOC106573699 coding downstream 1263541 25679909 ~ 25712438 (-)
LOC110520008 kcng4 coding downstream 1409386 25537115 ~ 25566593 (-)
LOC118966748 NA coding upstream 167146 27143360 ~ 27143413 (-)
LOC110520098 LOC106573710 coding upstream 229697 27205911 ~ 27215251 (-)
LOC110532124 LOC104966864 coding upstream 249949 27226163 ~ 27299859 (-)
LOC110532131 aars coding upstream 340458 27316672 ~ 27321126 (-)
LOC110520123 LOC106573712 coding upstream 356334 27332548 ~ 27342006 (-)
G27294 NA non-coding downstream 2034 26973746 ~ 26973945 (-)
G27273 NA non-coding downstream 18766 26956917 ~ 26957213 (-)
G27271 NA non-coding downstream 19237 26956421 ~ 26956742 (-)
G27253 NA non-coding downstream 25229 26941309 ~ 26950750 (-)
G27257 NA non-coding downstream 35801 26939946 ~ 26940178 (-)
G27414 NA non-coding upstream 103647 27079861 ~ 27080062 (-)
G27462 NA non-coding upstream 144492 27120706 ~ 27120919 (-)
G27478 NA non-coding upstream 155468 27131682 ~ 27131929 (-)
G27476 LOC106573708 non-coding upstream 156713 27132927 ~ 27135021 (-)
G27481 NA non-coding upstream 160886 27137100 ~ 27137330 (-)
G25117 zfpm1 other downstream 1693961 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 1694949 25280592 ~ 25281030 (-)
LOC110518671 klhl36 other downstream 2024592 24944908 ~ 24972465 (-)
LOC118956210 NA other downstream 2037278 24910984 ~ 24938701 (-)
znf276 znf276 other downstream 2111145 24853824 ~ 24865158 (-)
LOC110520292 gnao1 other upstream 659874 27631001 ~ 27781768 (-)
G28870 NA other upstream 1081229 28057443 ~ 28066305 (-)
G29355 NA other upstream 1727673 28703887 ~ 28704356 (-)
G29906 mef2a other upstream 2304062 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 4155679 31131151 ~ 31132900 (-)

Expression



Co-expression Network