Gene
RNA
| Item | Value |
|---|---|
| gene id | G28074 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 27505403 ~ 27506148 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32168 | True | 746 | lncRNA | 0.36 | 1 | 27505403 | 27506148 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520206 | herpud1 | coding | downstream | 7348 | 27490544 ~ 27498055 (-) |
| LOC110520201 | NA | coding | downstream | 18522 | 27485485 ~ 27486881 (-) |
| LOC110520192 | nlrc5 | coding | downstream | 37952 | 27447044 ~ 27467451 (-) |
| LOC110520152 | cpne2 | coding | downstream | 60034 | 27405059 ~ 27445369 (-) |
| LOC110520144 | rspry1 | coding | downstream | 112822 | 27375840 ~ 27392581 (-) |
| LOC110520211 | nup93 | coding | upstream | 1453 | 27507601 ~ 27544963 (-) |
| mt2 | NA | coding | upstream | 45187 | 27551330 ~ 27552061 (-) |
| LOC110520267 | LOC106573725 | coding | upstream | 60208 | 27566356 ~ 27575092 (-) |
| LOC110520275 | LOC106573726 | coding | upstream | 69599 | 27575747 ~ 27610097 (-) |
| LOC110520292 | gnao1 | coding | upstream | 124853 | 27631001 ~ 27781768 (-) |
| G28033 | NA | non-coding | downstream | 100680 | 27403854 ~ 27404723 (-) |
| G28024 | NA | non-coding | downstream | 153748 | 27351305 ~ 27351655 (-) |
| LOC110532124 | LOC104966864 | non-coding | downstream | 242102 | 27226163 ~ 27299859 (-) |
| G27969 | NA | non-coding | downstream | 272873 | 27223487 ~ 27232530 (-) |
| G28106 | NA | non-coding | upstream | 40378 | 27546526 ~ 27546794 (-) |
| G28112 | NA | non-coding | upstream | 55797 | 27561945 ~ 27562365 (-) |
| G28113 | NA | non-coding | upstream | 56359 | 27562507 ~ 27562707 (-) |
| G25117 | zfpm1 | other | downstream | 2223385 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 2224373 | 25280592 ~ 25281030 (-) |
| LOC110518671 | klhl36 | other | downstream | 2554016 | 24944908 ~ 24972465 (-) |
| LOC118956210 | NA | other | downstream | 2566702 | 24910984 ~ 24938701 (-) |
| znf276 | znf276 | other | downstream | 2640569 | 24853824 ~ 24865158 (-) |
| G28870 | NA | other | upstream | 551295 | 28057443 ~ 28066305 (-) |
| G29355 | NA | other | upstream | 1197739 | 28703887 ~ 28704356 (-) |
| G29906 | mef2a | other | upstream | 1774128 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 3625745 | 31131151 ~ 31132900 (-) |
