Gene
RNA
| Item | Value |
|---|---|
| gene id | G28143 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 27629495 ~ 27629917 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32249 | True | 219 | lncRNA | 0.54 | 2 | 27629495 | 27629917 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520275 | LOC106573726 | coding | downstream | 19398 | 27575747 ~ 27610097 (-) |
| LOC110520267 | LOC106573725 | coding | downstream | 54403 | 27566356 ~ 27575092 (-) |
| mt2 | NA | coding | downstream | 77434 | 27551330 ~ 27552061 (-) |
| LOC110520211 | nup93 | coding | downstream | 84532 | 27507601 ~ 27544963 (-) |
| LOC110520206 | herpud1 | coding | downstream | 131440 | 27490544 ~ 27498055 (-) |
| LOC110520292 | gnao1 | coding | upstream | 1084 | 27631001 ~ 27781768 (-) |
| LOC110520323 | LOC106573733 | coding | upstream | 220635 | 27850552 ~ 27978660 (-) |
| cfdp1 | cfdp1 | coding | upstream | 354932 | 27984849 ~ 28033545 (-) |
| LOC110532142 | carmil2 | coding | upstream | 409005 | 28038922 ~ 28090334 (-) |
| ctcf | ctcf | coding | upstream | 468959 | 28098876 ~ 28106017 (-) |
| G28113 | NA | non-coding | downstream | 66788 | 27562507 ~ 27562707 (-) |
| G28112 | NA | non-coding | downstream | 67130 | 27561945 ~ 27562365 (-) |
| G28106 | NA | non-coding | downstream | 82701 | 27546526 ~ 27546794 (-) |
| G28278 | NA | non-coding | upstream | 214316 | 27844233 ~ 27844580 (-) |
| G28749 | NA | non-coding | upstream | 214723 | 27844640 ~ 27845206 (-) |
| G28763 | NA | non-coding | upstream | 242900 | 27872817 ~ 27873059 (-) |
| G28764 | NA | non-coding | upstream | 244802 | 27874719 ~ 27875029 (-) |
| G28765 | NA | non-coding | upstream | 245490 | 27875407 ~ 27875654 (-) |
| G25117 | zfpm1 | other | downstream | 2347477 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 2348465 | 25280592 ~ 25281030 (-) |
| LOC110518671 | klhl36 | other | downstream | 2678108 | 24944908 ~ 24972465 (-) |
| LOC118956210 | NA | other | downstream | 2690794 | 24910984 ~ 24938701 (-) |
| znf276 | znf276 | other | downstream | 2764661 | 24853824 ~ 24865158 (-) |
| G28870 | NA | other | upstream | 427526 | 28057443 ~ 28066305 (-) |
| G29355 | NA | other | upstream | 1073970 | 28703887 ~ 28704356 (-) |
| G29906 | mef2a | other | upstream | 1650359 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 3501976 | 31131151 ~ 31132900 (-) |
