Gene
RNA
| Item | Value |
|---|---|
| gene id | G28749 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 27844640 ~ 27845206 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32921 | True | 567 | lncRNA | 0.42 | 1 | 27844640 | 27845206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520292 | gnao1 | coding | downstream | 62872 | 27631001 ~ 27781768 (-) |
| LOC110520275 | LOC106573726 | coding | downstream | 234543 | 27575747 ~ 27610097 (-) |
| LOC110520267 | LOC106573725 | coding | downstream | 269548 | 27566356 ~ 27575092 (-) |
| mt2 | NA | coding | downstream | 292579 | 27551330 ~ 27552061 (-) |
| LOC110520211 | nup93 | coding | downstream | 299677 | 27507601 ~ 27544963 (-) |
| LOC110520323 | LOC106573733 | coding | upstream | 5346 | 27850552 ~ 27978660 (-) |
| cfdp1 | cfdp1 | coding | upstream | 139643 | 27984849 ~ 28033545 (-) |
| LOC110532142 | carmil2 | coding | upstream | 193716 | 28038922 ~ 28090334 (-) |
| ctcf | ctcf | coding | upstream | 253670 | 28098876 ~ 28106017 (-) |
| ripor1 | fam65a | coding | upstream | 261180 | 28106386 ~ 28220829 (-) |
| G28278 | NA | non-coding | downstream | 60 | 27844233 ~ 27844580 (-) |
| G28143 | NA | non-coding | downstream | 214723 | 27629495 ~ 27629917 (-) |
| G28113 | NA | non-coding | downstream | 281933 | 27562507 ~ 27562707 (-) |
| G28112 | NA | non-coding | downstream | 282275 | 27561945 ~ 27562365 (-) |
| G28763 | NA | non-coding | upstream | 27611 | 27872817 ~ 27873059 (-) |
| G28764 | NA | non-coding | upstream | 29513 | 27874719 ~ 27875029 (-) |
| G28765 | NA | non-coding | upstream | 30201 | 27875407 ~ 27875654 (-) |
| G28858 | NA | non-coding | upstream | 174997 | 28020203 ~ 28020659 (-) |
| G28949 | NA | non-coding | upstream | 492470 | 28337676 ~ 28338209 (-) |
| G25117 | zfpm1 | other | downstream | 2562622 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 2563610 | 25280592 ~ 25281030 (-) |
| LOC110518671 | klhl36 | other | downstream | 2893253 | 24944908 ~ 24972465 (-) |
| LOC118956210 | NA | other | downstream | 2905939 | 24910984 ~ 24938701 (-) |
| G28870 | NA | other | upstream | 212237 | 28057443 ~ 28066305 (-) |
| G29355 | NA | other | upstream | 858681 | 28703887 ~ 28704356 (-) |
| G29906 | mef2a | other | upstream | 1435070 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 3286687 | 31131151 ~ 31132900 (-) |
| LOC110521048 | LOC100194695 | other | upstream | 3580917 | 31426123 ~ 31444964 (-) |
