G28289


Basic Information

Item Value
gene id G28289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 27862488 ~ 27863211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU32402
CTCCATCAATTATTAATGAGAAGTGAGACTTCACAGACAGATGACCAATTGAGTCAGGAAGTGTGTCTAAGGCAGTAGAGAGGAATAATAGCCATCAATCTTGTGATGAGGATGAAATCACTTAATTGACATAGGAGACAATAAGTGGCGAGGcaggacagtgagaggacatgaATACCACAGCCCCTCTCATACACCGGACACCGGTATTGCTGATGATATGGAAGATGAGAAATTTGTTCTGGGTGTGTTACTGTATATGTTACTGAATACTTTACTAGAAAGGCAGGGAAGTGCAGTGTTTTAACATAAACACAGGTGAGGTAAACATAtttttcccatgtcaataaaaccctttgaattgagagagagacgaAAACAGCaagtccgggacaaggtagcacatctggtGAACAGGGTTCCATAGTCACAGGCAAAACaacagaaactggatcagcagcacgaccaggtggactggggacggagacagccaggagtcatcagacatggtcctagggctcaggagAGAGATCATGTGTTTCTAGCTGACTCCTCACCTGCTGGTTGTATTGGCCGTGGGTCGGGGGAACGTCATAGATGTCCTGGGACTGCTGGGATGGAGGCAGGTGTCTGGGGGGGACGTCATACTCATCCTGCTCTGACTTCCCTGTGTCATACACATATACCTGACCCACCCGTGTTGGCACCACCacctgagagatgg

Function

NR:

description
PREDICTED: breast cancer anti-estrogen resistance protein 1-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32402 True 724 lncRNA 0.44 1 27862488 27863211
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110520308 nudt21 coding upstream 22231 27834798 ~ 27840257 (+)
LOC110532139 LOC106573731 coding upstream 31910 27816479 ~ 27830578 (+)
LOC110520258 LOC106560847 coding upstream 298182 27560102 ~ 27565152 (+)
LOC110520245 bbs2 coding upstream 302701 27553383 ~ 27559787 (+)
LOC110520156 fam192a coding upstream 457743 27392524 ~ 27404745 (+)
LOC110520354 LOC106573739 coding downstream 170496 28033707 ~ 28037291 (+)
pard6a pard6a coding downstream 379359 28242570 ~ 28288088 (+)
tsnaxip1 tsnaxip1 coding downstream 468757 28331968 ~ 28338395 (+)
nutf2 nutf2 coding downstream 475089 28338300 ~ 28346361 (+)
LOC110520482 edc4 coding downstream 483330 28346541 ~ 28385332 (+)
G28287 NA non-coding upstream 3727 27858321 ~ 27858761 (+)
G28286 NA non-coding upstream 7033 27855211 ~ 27855455 (+)
G28284 LOC106573733 non-coding upstream 9617 27850584 ~ 27852871 (+)
G27880 NA non-coding upstream 24142 27792605 ~ 27838346 (+)
G27791 NA non-coding upstream 103319 27675685 ~ 27759169 (+)
G28296 NA non-coding downstream 10821 27874032 ~ 27874253 (+)
G28300 LOC106573733 non-coding downstream 19373 27882584 ~ 27883213 (+)
G28321 NA non-coding downstream 40507 27903718 ~ 27904485 (+)
G28423 NA non-coding downstream 200629 28063840 ~ 28068937 (+)
G28285 LOC106573733 other upstream 7534 27853757 ~ 27854954 (+)
G28280 NA other upstream 17477 27844640 ~ 27845011 (+)
G27553 NA other upstream 545971 27257563 ~ 27316517 (+)
si:ch211-216l23.2 LOC106573703 other upstream 1175690 26680211 ~ 26696018 (+)
G28416 carmil2 other downstream 184415 28047626 ~ 28048362 (+)
LOC110520661 LOC106573762 other downstream 1202445 28903691 ~ 29067795 (+)
mef2aa mef2a other downstream 1329518 29188958 ~ 29316547 (+)
G33249 NA other downstream 3987262 31850473 ~ 31850969 (+)
G33284 NA other downstream 4093319 31956530 ~ 31961547 (+)

Expression

G28289 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
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G28289 Expression in each Bioproject

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G28289 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 4.
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Co-expression Network