Gene
RNA
| Item | Value |
|---|---|
| gene id | G28764 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 27874719 ~ 27875029 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32936 | True | 311 | lncRNA | 0.53 | 1 | 27874719 | 27875029 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520292 | gnao1 | coding | downstream | 92951 | 27631001 ~ 27781768 (-) |
| LOC110520275 | LOC106573726 | coding | downstream | 264622 | 27575747 ~ 27610097 (-) |
| LOC110520267 | LOC106573725 | coding | downstream | 299627 | 27566356 ~ 27575092 (-) |
| mt2 | NA | coding | downstream | 322658 | 27551330 ~ 27552061 (-) |
| LOC110520211 | nup93 | coding | downstream | 329756 | 27507601 ~ 27544963 (-) |
| cfdp1 | cfdp1 | coding | upstream | 109820 | 27984849 ~ 28033545 (-) |
| LOC110532142 | carmil2 | coding | upstream | 163893 | 28038922 ~ 28090334 (-) |
| ctcf | ctcf | coding | upstream | 223847 | 28098876 ~ 28106017 (-) |
| ripor1 | fam65a | coding | upstream | 231357 | 28106386 ~ 28220829 (-) |
| ranbp10 | LOC106560827 | coding | upstream | 419419 | 28294448 ~ 28338523 (-) |
| G28763 | NA | non-coding | downstream | 1660 | 27872817 ~ 27873059 (-) |
| G28749 | NA | non-coding | downstream | 29513 | 27844640 ~ 27845206 (-) |
| G28278 | NA | non-coding | downstream | 30139 | 27844233 ~ 27844580 (-) |
| G28143 | NA | non-coding | downstream | 244802 | 27629495 ~ 27629917 (-) |
| G28765 | NA | non-coding | upstream | 378 | 27875407 ~ 27875654 (-) |
| G28858 | NA | non-coding | upstream | 145174 | 28020203 ~ 28020659 (-) |
| G28949 | NA | non-coding | upstream | 462647 | 28337676 ~ 28338209 (-) |
| G29045 | NA | non-coding | upstream | 538414 | 28413443 ~ 28496850 (-) |
| G29095 | NA | non-coding | upstream | 624046 | 28499075 ~ 28499343 (-) |
| G25117 | zfpm1 | other | downstream | 2592701 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 2593689 | 25280592 ~ 25281030 (-) |
| LOC110518671 | klhl36 | other | downstream | 2923332 | 24944908 ~ 24972465 (-) |
| LOC118956210 | NA | other | downstream | 2936018 | 24910984 ~ 24938701 (-) |
| G28870 | NA | other | upstream | 182414 | 28057443 ~ 28066305 (-) |
| G29355 | NA | other | upstream | 828858 | 28703887 ~ 28704356 (-) |
| G29906 | mef2a | other | upstream | 1405247 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 3256864 | 31131151 ~ 31132900 (-) |
| LOC110521048 | LOC100194695 | other | upstream | 3551094 | 31426123 ~ 31444964 (-) |
