Gene
RNA
| Item | Value |
|---|---|
| gene id | G28858 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 28020203 ~ 28020659 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU33035 | True | 365 | lncRNA | 0.43 | 2 | 28020203 | 28020659 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520323 | LOC106573733 | coding | downstream | 41543 | 27850552 ~ 27978660 (-) |
| LOC110520292 | gnao1 | coding | downstream | 238435 | 27631001 ~ 27781768 (-) |
| LOC110520275 | LOC106573726 | coding | downstream | 410106 | 27575747 ~ 27610097 (-) |
| LOC110520267 | LOC106573725 | coding | downstream | 445111 | 27566356 ~ 27575092 (-) |
| mt2 | NA | coding | downstream | 468142 | 27551330 ~ 27552061 (-) |
| LOC110532142 | carmil2 | coding | upstream | 18263 | 28038922 ~ 28090334 (-) |
| ctcf | ctcf | coding | upstream | 78217 | 28098876 ~ 28106017 (-) |
| ripor1 | fam65a | coding | upstream | 85727 | 28106386 ~ 28220829 (-) |
| ranbp10 | LOC106560827 | coding | upstream | 273789 | 28294448 ~ 28338523 (-) |
| necab2 | LOC106573751 | coding | upstream | 514498 | 28535157 ~ 28661453 (-) |
| G28765 | NA | non-coding | downstream | 144549 | 27875407 ~ 27875654 (-) |
| G28764 | NA | non-coding | downstream | 145174 | 27874719 ~ 27875029 (-) |
| G28763 | NA | non-coding | downstream | 147144 | 27872817 ~ 27873059 (-) |
| G28749 | NA | non-coding | downstream | 174997 | 27844640 ~ 27845206 (-) |
| G28278 | NA | non-coding | downstream | 175623 | 27844233 ~ 27844580 (-) |
| G28949 | NA | non-coding | upstream | 317017 | 28337676 ~ 28338209 (-) |
| G29045 | NA | non-coding | upstream | 392784 | 28413443 ~ 28496850 (-) |
| G29095 | NA | non-coding | upstream | 478416 | 28499075 ~ 28499343 (-) |
| G29349 | NA | non-coding | upstream | 673257 | 28693916 ~ 28694324 (-) |
| G29359 | NA | non-coding | upstream | 690346 | 28711005 ~ 28711265 (-) |
| G25117 | zfpm1 | other | downstream | 2738185 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 2739173 | 25280592 ~ 25281030 (-) |
| LOC110518671 | klhl36 | other | downstream | 3068816 | 24944908 ~ 24972465 (-) |
| LOC118956210 | NA | other | downstream | 3081502 | 24910984 ~ 24938701 (-) |
| G28870 | NA | other | upstream | 36784 | 28057443 ~ 28066305 (-) |
| G29355 | NA | other | upstream | 683228 | 28703887 ~ 28704356 (-) |
| G29906 | mef2a | other | upstream | 1259617 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 3111234 | 31131151 ~ 31132900 (-) |
| LOC110521048 | LOC100194695 | other | upstream | 3405464 | 31426123 ~ 31444964 (-) |
