Gene
RNA
| Item | Value |
|---|---|
| gene id | G28487 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 28167928 ~ 28187760 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU32631 | False | 280 | lncRNA | 0.55 | 3 | 28167928 | 28187722 |
| TU32632 | False | 318 | lncRNA | 0.36 | 3 | 28167928 | 28187760 |
| TU32633 | True | 305 | lncRNA | 0.49 | 2 | 28184378 | 28187722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520354 | LOC106573739 | coding | upstream | 130637 | 28033707 ~ 28037291 (+) |
| LOC110520308 | nudt21 | coding | upstream | 327671 | 27834798 ~ 27840257 (+) |
| LOC110532139 | LOC106573731 | coding | upstream | 337350 | 27816479 ~ 27830578 (+) |
| LOC110520258 | LOC106560847 | coding | upstream | 603622 | 27560102 ~ 27565152 (+) |
| LOC110520245 | bbs2 | coding | upstream | 608141 | 27553383 ~ 27559787 (+) |
| pard6a | pard6a | coding | downstream | 54810 | 28242570 ~ 28288088 (+) |
| tsnaxip1 | tsnaxip1 | coding | downstream | 144208 | 28331968 ~ 28338395 (+) |
| nutf2 | nutf2 | coding | downstream | 150540 | 28338300 ~ 28346361 (+) |
| LOC110520482 | edc4 | coding | downstream | 158781 | 28346541 ~ 28385332 (+) |
| nrn1la | LOC106560823 | coding | downstream | 200208 | 28387968 ~ 28444370 (+) |
| G28473 | NA | non-coding | upstream | 14139 | 28152725 ~ 28153789 (+) |
| G28423 | NA | non-coding | upstream | 98991 | 28063840 ~ 28068937 (+) |
| G28321 | NA | non-coding | upstream | 263443 | 27903718 ~ 27904485 (+) |
| G28300 | LOC106573733 | non-coding | upstream | 284715 | 27882584 ~ 27883213 (+) |
| G28636 | NA | non-coding | downstream | 309292 | 28497052 ~ 28497367 (+) |
| G28638 | NA | non-coding | downstream | 311965 | 28499725 ~ 28499948 (+) |
| G28653 | NA | non-coding | downstream | 347407 | 28535167 ~ 28610883 (+) |
| G29227 | NA | non-coding | downstream | 489466 | 28677226 ~ 28677802 (+) |
| G29229 | NA | non-coding | downstream | 492422 | 28680182 ~ 28680381 (+) |
| G28416 | carmil2 | other | upstream | 119566 | 28047626 ~ 28048362 (+) |
| G28285 | LOC106573733 | other | upstream | 312974 | 27853757 ~ 27854954 (+) |
| G28280 | NA | other | upstream | 322917 | 27844640 ~ 27845011 (+) |
| G27553 | NA | other | upstream | 851411 | 27257563 ~ 27316517 (+) |
| LOC110520661 | LOC106573762 | other | downstream | 877896 | 28903691 ~ 29067795 (+) |
| mef2aa | mef2a | other | downstream | 1004969 | 29188958 ~ 29316547 (+) |
| G33249 | NA | other | downstream | 3662713 | 31850473 ~ 31850969 (+) |
| G33284 | NA | other | downstream | 3768770 | 31956530 ~ 31961547 (+) |
| G33681 | LOC106573476 | other | downstream | 4263094 | 32450854 ~ 32452385 (+) |
