G29349


Basic Information

Item Value
gene id G29349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 28693916 ~ 28694324 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU33572
ACAAAGCTTTGCCCCAGATTATGTTAGTGTAACCAATAATATATGGACCCAGTGGACATGAGAGGAAGTTGTTGACCAGAGGGGTTCGGCTCAAATCCAAAATTAGTCCACTTATTGCAGTATGCTTAAACCTGAATACACATTATGCCTATTGGAAGATGAACTTGGGTTTAAGCTATTTTCAAGGATTCTATGGGGATAGCAACAAGTACTTTGCACTCTCCATCTCATATCATCAGAATGATTGAATTCTGAATGAGAGAAAGAATGAGGCGTCACCTCTATCATCATAATGAAATTATTTCCTGTCCCCCCTATTTTACTTTTATTATCACTAGCACAAACTCTATCACAATGTTTGTATAACGCCCCTTTTCATGCTGAACCTGTGCATATTTTTACACATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33572 True 409 lncRNA 0.38 1 28693916 28694324

Neighbor

gene id symbol gene type direction distance location
necab2 LOC106573751 coding downstream 32463 28535157 ~ 28661453 (-)
ranbp10 LOC106560827 coding downstream 355393 28294448 ~ 28338523 (-)
ripor1 fam65a coding downstream 473087 28106386 ~ 28220829 (-)
ctcf ctcf coding downstream 587899 28098876 ~ 28106017 (-)
LOC110532142 carmil2 coding downstream 603582 28038922 ~ 28090334 (-)
LOC110520584 LOC106573758 coding upstream 99842 28794166 ~ 28830947 (-)
LOC110520608 LOC106573759 coding upstream 140954 28835278 ~ 28842650 (-)
LOC110532163 NA coding upstream 168657 28862981 ~ 28882631 (-)
LOC118946030 NA coding upstream 677609 29371933 ~ 29380725 (-)
nr2f2 LOC106573769 coding upstream 968624 29662948 ~ 29672991 (-)
G29095 NA non-coding downstream 194573 28499075 ~ 28499343 (-)
G29045 NA non-coding downstream 197066 28413443 ~ 28496850 (-)
G28949 NA non-coding downstream 355707 28337676 ~ 28338209 (-)
G28858 NA non-coding downstream 673257 28020203 ~ 28020659 (-)
G28765 NA non-coding downstream 818262 27875407 ~ 27875654 (-)
G29359 NA non-coding upstream 16681 28711005 ~ 28711265 (-)
G29365 NA non-coding upstream 23918 28718242 ~ 28718493 (-)
G29369 NA non-coding upstream 33086 28727410 ~ 28731732 (-)
G29384 NA non-coding upstream 53988 28748312 ~ 28749506 (-)
G29378 LOC106573754 non-coding upstream 55653 28749977 ~ 28763663 (-)
G28870 NA other downstream 627611 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 1050796 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 3411898 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 3412886 25280592 ~ 25281030 (-)
LOC110518671 klhl36 other downstream 3742529 24944908 ~ 24972465 (-)
G29355 NA other upstream 9563 28703887 ~ 28704356 (-)
G29906 mef2a other upstream 585952 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 2437569 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 2731799 31426123 ~ 31444964 (-)
G33386 NA other upstream 3290447 31984771 ~ 31989249 (-)

Expression


Co-expression Network