G29257



Basic Information


Item Value
gene id G29257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 28713383 ~ 28713875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU33472
CACTTCATGACTcaacacatactgtaggtttCCTAGAGGAGGATCACCAGGAGTGATTATATCATGTAATTCCTCTTTTGTTTGACTGTGTGCGTGCACAAAGTCCTGTATGACAGGAAAATTGGACTCTACAGTGTATATCAAAACATTTGATATCAGTACAGAGTAAattcccctccctccacccccactCTACATCACACACAAGAGGTTCCACTGTGATGTAGTTGTCTGAGAAGGACAGGCGTTCCTCCTTCAGCTGCCTGCGTCGGTCCTGGAAGGTGCGTGAGAGCAGGGAGAGACGGTCACGTAGAGTGGGGTCTGCGTCACACTCTGTCAGGAACTGATCCatgtcatcctcctcctcccgctGCAGTTCGGAACAGAAcctagagcagagcagagatacacacagagagagagagtatggggatgaggtgggggatggggaacagaggagCATCTGAACAGGCTACATAAAACAGCATTGATG

Function


NR:

description
PREDICTED: hydrocephalus-inducing protein homolog isoform X3

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU33472 True 493 lncRNA 0.32 1 28713383 28713875

Neighbor


gene id symbol gene type direction distance location
LOC110532150 LOC106560818 coding upstream 179078 28530845 ~ 28534305 (+)
mbtps1 LOC106573750 coding upstream 187181 28500843 ~ 28526202 (+)
pskh1 pskh1 coding upstream 219330 28478880 ~ 28494053 (+)
nrn1la LOC106560823 coding upstream 269013 28387968 ~ 28444370 (+)
LOC110520482 edc4 coding upstream 328051 28346541 ~ 28385332 (+)
pnp6 LOC106573753 coding downstream 24240 28738115 ~ 28742553 (+)
LOC110520547 LOC106573754 coding downstream 36007 28749882 ~ 28763697 (+)
LOC110520559 LOC106573756 coding downstream 56093 28769968 ~ 28778739 (+)
LOC110520570 LOC106573757 coding downstream 68022 28781897 ~ 28786756 (+)
LOC110520650 LOC106573761 coding downstream 128717 28842592 ~ 28844660 (+)
G29256 NA non-coding upstream 1167 28711950 ~ 28712216 (+)
G29253 NA non-coding upstream 8483 28704617 ~ 28704900 (+)
G29252 NA non-coding upstream 8855 28703825 ~ 28704528 (+)
G29251 hydin non-coding upstream 10039 28702791 ~ 28703344 (+)
G29244 hydin non-coding upstream 16425 28696727 ~ 28696958 (+)
G29262 NA non-coding downstream 3346 28717221 ~ 28717453 (+)
G29269 NA non-coding downstream 14226 28728101 ~ 28730227 (+)
G29275 NA non-coding downstream 23589 28737464 ~ 28737735 (+)
G29223 NA non-coding downstream 30013 28743888 ~ 28747658 (+)
G29288 NA non-coding downstream 66883 28780758 ~ 28781315 (+)
G28416 carmil2 other upstream 665021 28047626 ~ 28048362 (+)
G28285 LOC106573733 other upstream 858429 27853757 ~ 27854954 (+)
G28280 NA other upstream 868372 27844640 ~ 27845011 (+)
LOC110520258 LOC106560847 other upstream 1148231 27560102 ~ 27565152 (+)
G27553 NA other upstream 1396866 27257563 ~ 27316517 (+)
LOC110520661 LOC106573762 other downstream 351781 28903691 ~ 29067795 (+)
mef2aa mef2a other downstream 478854 29188958 ~ 29316547 (+)
G33249 NA other downstream 3136598 31850473 ~ 31850969 (+)
G33284 NA other downstream 3242655 31956530 ~ 31961547 (+)
G33681 LOC106573476 other downstream 3736979 32450854 ~ 32452385 (+)

Expression



Co-expression Network