G29320


Basic Information

Item Value
gene id G29320
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 28833561 ~ 28835039 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU33542
aaaaacaagcatttgtgATTTGCATTATATAAACTACATTCACCAGAAATAAGGACACGTTTAGTACAGTTTTTTCTGAGGTAGAAAAACAATTAAACATGGAGATAAATGTTAAGAATTACATACATTAAGTTATAGAATGCACAGCCATATATATGAAATTCAACTGTAATTCTCAACATTATACAAGCAACTCAAaaaggtacactacatgaccaaaagtatgtggacaccccttaaaaatAGTGGATTtgcctatttcagccacacccattgctgacaggtgaataaaattgagcatagccatgcaatctccatagacaaacattgccagtagaatggcctgtactgaagagctcagtgactttcaacatggcaccgtcatagggtgccacctttccaacGAATCATTTAataacatttctgccctgctagagcttccccgggcaactgtaagtgctgttattgtgaagtggaaatgtctaggagcaacaattgcaaagtggtaggccatacaagctcacagaatgggaccgctgagtgctgaagcgcataaaaatAGTTTTGCAACCGAGGAGATACtgactactgagttccaaaccgCCTTTGCAAGCAACGGAAGCACAATAACGGTTTGTCaggagcatcatgaaatgggtttccattgccgagcagccgcacacatgcCTAAGATCACCAGGTGCaacgccaagcgtcggctggagtggtgtaaaacttgcTGCAATTCGACTCTGGAGCAGCGAAAACATGTTCTCTGCAGTCCAACGGAacatgggtttggcggatgccaggagaacgctacctgctcgaatgcatagtggccactgtaaagtttggtggaggaggaataatgatctggggctgtttttccatgattcaggctaggccccttagttccagtgaagggaaatcttaacgctacagcatacaatgacattcttgacgattctgtgcttccatctttgtggaaacagtttgaggaaggtattttcctgtttcaacacgataatgcccccatgcacaaagcaaggtccatacagaaatggtttgtcaagatcggtgtgtaaaaatttgactggcctgcacagagccctgacctcaacccctttgaacacctttgggatgaattggaacgccgaaaGAAAGTCCccacagtaatgttccaacatctagtggaaagccttcccagaagagtggaggctgttatagcagcaaaggagggaccaactccatattaatgcccatgattttggaatgagatgttcgacaaacttttggccatgtagtgtagctTAATCAAGACCACAGACAGTAGCCTACGAATGACAGCATACAGTGACAGGTCCACCAAAGTTGTACAACCGACTTTAAAATCAACCTagtataaaaaaaaatgataagAGCAATTTAAGAAGTTGAGACATGCACATCATTCACACACAGCAGACAGAAAGTCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33542 True 1479 lncRNA 0.43 1 28833561 28835039

Neighbor

gene id symbol gene type direction distance location
LOC110520570 LOC106573757 coding upstream 46805 28781897 ~ 28786756 (+)
LOC110520559 LOC106573756 coding upstream 54822 28769968 ~ 28778739 (+)
LOC110520547 LOC106573754 coding upstream 69864 28749882 ~ 28763697 (+)
pnp6 LOC106573753 coding upstream 91008 28738115 ~ 28742553 (+)
LOC110532150 LOC106560818 coding upstream 299256 28530845 ~ 28534305 (+)
LOC110520650 LOC106573761 coding downstream 7553 28842592 ~ 28844660 (+)
LOC110520598 LOC106573760 coding downstream 9695 28844734 ~ 28860495 (+)
LOC110520661 LOC106573762 coding downstream 68652 28903691 ~ 29067795 (+)
LOC110520673 LOC106573765 coding downstream 239316 29074355 ~ 29084730 (+)
mef2aa mef2a coding downstream 353919 29188958 ~ 29316547 (+)
G29296 NA non-coding upstream 37418 28794173 ~ 28796143 (+)
G29291 NA non-coding upstream 46089 28787231 ~ 28787472 (+)
G29288 NA non-coding upstream 52246 28780758 ~ 28781315 (+)
G29223 NA non-coding upstream 85903 28743888 ~ 28747658 (+)
G29275 NA non-coding upstream 95826 28737464 ~ 28737735 (+)
G29321 NA non-coding downstream 3654 28838693 ~ 28839112 (+)
G29322 NA non-coding downstream 4514 28839553 ~ 28840172 (+)
G29323 NA non-coding downstream 5569 28840608 ~ 28840825 (+)
G29328 NA non-coding downstream 11215 28846254 ~ 28846459 (+)
G28416 carmil2 other upstream 785199 28047626 ~ 28048362 (+)
G28285 LOC106573733 other upstream 978607 27853757 ~ 27854954 (+)
G28280 NA other upstream 988550 27844640 ~ 27845011 (+)
LOC110520258 LOC106560847 other upstream 1268409 27560102 ~ 27565152 (+)
G27553 NA other upstream 1517044 27257563 ~ 27316517 (+)
G33249 NA other downstream 3015434 31850473 ~ 31850969 (+)
G33284 NA other downstream 3121491 31956530 ~ 31961547 (+)
G33681 LOC106573476 other downstream 3615815 32450854 ~ 32452385 (+)

Expression


Co-expression Network