G29607



Basic Information


Item Value
gene id G29607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 28905463 ~ 28906336 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU33855
tttttttcctgTATATTTGCCTAATGTTGTTGGGGAATATTACTTTGTTTTAATGTTactctttaataatacttttacttgagtgtacttttaacagagctgagatttactttgaagtgCAAAGTATAGCAATACAGATGAAATCAGTCATTGACAAAGAATTGGTGGCATAGCAGGAAGATCGGTGTGCCGTGAACCAAGGGATTATGAGCTAAAATCCCAGGTGAGGagatgttgaataataattactgtatacaTGCACAATGTCATGATGTATGTCAAAGTGTGTCAAatatgtatgttgaaaacattgCATGCcaaaagcactgtgtgtgtgtaacctgttcCACAGCATTTTTTAGTGAAGATGCCCAAATAATAATTTCTAGTTGAGTAAGCATATGGGACAAGTTGAGCAAGCATATGAGACAAGTTGAGCAAACACAAAACTTTAAATCGACAACATTTTCTCAAGTTGGAGCTAAATTTGGGCCAACAAAAAAATGTTACATTCAGGTAAGACTAATTCAAAAGTTGAGTAAACTAAAAAAACAGCTGTGGAACCAGTTAGGGTTCTACAcggaaccaaaaggggttattcaaagggttattCTATTGGgtcagccaaagaaccctttttggttatagATAGCACTTTTTTCTTCTAAGACTGTACCTTTATTTGAAGGCACTGAAGTGGATAAAGAGACGCACTAGTCCTTTGTATAGGCTATTGTAAACTGGAGAAAAACTAGGCTTATTTCATTTAACACAGTCCTCCAGGATGTGACATCAGGTCCTATATGCATTTTTTGTCGCTAAAATAAAAGGCCAAAAGCTAAGATAAACCAATAGGACAGTATTTACCTATACT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU33855 True 874 lncRNA 0.35 1 28905463 28906336

Neighbor


gene id symbol gene type direction distance location
LOC110532163 NA coding downstream 22832 28862981 ~ 28882631 (-)
LOC110520608 LOC106573759 coding downstream 62813 28835278 ~ 28842650 (-)
LOC110520584 LOC106573758 coding downstream 74516 28794166 ~ 28830947 (-)
hydin hydin coding downstream 168155 28663539 ~ 28737308 (-)
necab2 LOC106573751 coding downstream 244010 28535157 ~ 28661453 (-)
LOC118946030 NA coding upstream 465597 29371933 ~ 29380725 (-)
nr2f2 LOC106573769 coding upstream 756612 29662948 ~ 29672991 (-)
LOC118964375 NA coding upstream 1371919 30278255 ~ 30284238 (-)
chd2 LOC106573776 coding upstream 1397283 30303619 ~ 30336415 (-)
LOC110520865 NA coding upstream 1440419 30346755 ~ 30352648 (-)
G29603 NA non-coding downstream 7369 28897876 ~ 28898094 (-)
G29434 NA non-coding downstream 24311 28880942 ~ 28881152 (-)
G29421 NA non-coding downstream 31392 28873572 ~ 28874071 (-)
G29409 NA non-coding downstream 42702 28862257 ~ 28862761 (-)
G29376 NA non-coding downstream 70520 28833569 ~ 28834943 (-)
G29665 NA non-coding upstream 89037 28995373 ~ 28995577 (-)
G29666 NA non-coding upstream 89627 28995963 ~ 28996162 (-)
G29668 NA non-coding upstream 92906 28999242 ~ 28999444 (-)
G29669 NA non-coding upstream 93397 28999733 ~ 28999995 (-)
G29681 LOC106573762 non-coding upstream 119648 29025984 ~ 29026396 (-)
G29355 NA other downstream 201107 28703887 ~ 28704356 (-)
G28870 NA other downstream 839158 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 1262343 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 3623445 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 3624433 25280592 ~ 25281030 (-)
G29906 mef2a other upstream 373940 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 2225557 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 2519787 31426123 ~ 31444964 (-)
G33386 NA other upstream 3078435 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 4200783 33107119 ~ 33108497 (-)

Expression



Co-expression Network