G29681 (LOC106573762)



Basic Information


Item Value
gene id G29681
gene name LOC106573762
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 29025984 ~ 29026396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU33929
GAAATCATGATACTACTCAATATAATACTGTAGACAACCCATAACCAGGACCATGCCTGATACTGGGGAGCCCTTGAGGTGAAGTGTGATCTCTACTGTCTTACTTATTGCTCTCATTGCGTGTGAAGCCTGATGGACACTCAGGCATGCACTCCCCTCCGTGGATGACAAAGTGAAAGTCACCGGCCAGGTGCACATGTTCACACAGGTCCATGGTAATGCAGCGCCAGCCCTCAAACTTGTAAGTGTCTGGGGGGCAGTCCTGCACGCAGCGGCCCTCGTGGTAGTAGTGCAGGCAGGCTGCGCAGGCCATGTCGTCGTCCGGCTCCGTACAGCTTCCCAGGCACTGGGCATGGCAACACTCACCACCGTCCGTACATGCCCGCCGCTCACACTTCTTCTCTGGGCACACT

Function


NR:

description
insulin-like growth factor 1 receptor

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU33929 True 413 lncRNA 0.55 1 29025984 29026396

Neighbor


gene id symbol gene type direction distance location
LOC110532163 NA coding downstream 143353 28862981 ~ 28882631 (-)
LOC110520608 LOC106573759 coding downstream 183334 28835278 ~ 28842650 (-)
LOC110520584 LOC106573758 coding downstream 195037 28794166 ~ 28830947 (-)
hydin hydin coding downstream 288676 28663539 ~ 28737308 (-)
necab2 LOC106573751 coding downstream 364531 28535157 ~ 28661453 (-)
LOC118946030 NA coding upstream 345537 29371933 ~ 29380725 (-)
nr2f2 LOC106573769 coding upstream 636552 29662948 ~ 29672991 (-)
LOC118964375 NA coding upstream 1251859 30278255 ~ 30284238 (-)
chd2 LOC106573776 coding upstream 1277223 30303619 ~ 30336415 (-)
LOC110520865 NA coding upstream 1320359 30346755 ~ 30352648 (-)
G29669 NA non-coding downstream 25989 28999733 ~ 28999995 (-)
G29668 NA non-coding downstream 26540 28999242 ~ 28999444 (-)
G29666 NA non-coding downstream 29822 28995963 ~ 28996162 (-)
G29665 NA non-coding downstream 30407 28995373 ~ 28995577 (-)
G29607 NA non-coding downstream 119648 28905463 ~ 28906336 (-)
G29690 NA non-coding upstream 7044 29033440 ~ 29033690 (-)
G29693 LOC106600297 non-coding upstream 11232 29037628 ~ 29038000 (-)
G29698 NA non-coding upstream 18028 29044424 ~ 29044728 (-)
G29699 LOC106573762 non-coding upstream 19196 29045592 ~ 29045859 (-)
G29700 LOC106573762 non-coding upstream 20725 29047121 ~ 29047353 (-)
G29355 NA other downstream 321628 28703887 ~ 28704356 (-)
G28870 NA other downstream 959679 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 1382864 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 3743966 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 3744954 25280592 ~ 25281030 (-)
G29906 mef2a other upstream 253880 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 2105497 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 2399727 31426123 ~ 31444964 (-)
G33386 NA other upstream 2958375 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 4080723 33107119 ~ 33108497 (-)

Expression



Co-expression Network