G29701



Basic Information


Item Value
gene id G29701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 29048718 ~ 29049162 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU33949
CGTTGATCTGCTGTTCTAAACTCACTCTATGTTCCTGAAAGCACAGAGGAActggactaaacaggaactacTTTTCACTGCCAAAATGTACTGTACCTACTAACTATAATAGCATCCAGATGAATTCCTAACTTCCTTAGgacatggactgtgtgtgtgaagTGATAGGCCTGTTTTCCCCACGCTAGTCCCGGAGAGAGCATGCAATATTCTAGCACACATACAGCTAGTGTACTGCGCAGGTCtgtgtatgcgcgtgtgtgtgagtcAGAGGCGAGGAGCTCTTACCAGACATCAGAGTTTGTGGTGAACACTCCGTCTTTCAGCGACTCTGGGGACATCCAGCGGACTGGCAGAAGGCCCTTCCCTCCTTTCCGATAGTAATCCGTCTCGTAGATGTCTCGCGTCATGCCAAAGTctgagaagaagagaagagaatttTGAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU33949 True 445 lncRNA 0.48 1 29048718 29049162

Neighbor


gene id symbol gene type direction distance location
LOC110532163 NA coding downstream 166087 28862981 ~ 28882631 (-)
LOC110520608 LOC106573759 coding downstream 206068 28835278 ~ 28842650 (-)
LOC110520584 LOC106573758 coding downstream 217771 28794166 ~ 28830947 (-)
hydin hydin coding downstream 311410 28663539 ~ 28737308 (-)
necab2 LOC106573751 coding downstream 387265 28535157 ~ 28661453 (-)
LOC118946030 NA coding upstream 322771 29371933 ~ 29380725 (-)
nr2f2 LOC106573769 coding upstream 613786 29662948 ~ 29672991 (-)
LOC118964375 NA coding upstream 1229093 30278255 ~ 30284238 (-)
chd2 LOC106573776 coding upstream 1254457 30303619 ~ 30336415 (-)
LOC110520865 NA coding upstream 1297593 30346755 ~ 30352648 (-)
G29700 LOC106573762 non-coding downstream 1365 29047121 ~ 29047353 (-)
G29699 LOC106573762 non-coding downstream 2859 29045592 ~ 29045859 (-)
G29698 NA non-coding downstream 3990 29044424 ~ 29044728 (-)
G29693 LOC106600297 non-coding downstream 10718 29037628 ~ 29038000 (-)
G29690 NA non-coding downstream 15028 29033440 ~ 29033690 (-)
G29709 NA non-coding upstream 11298 29060460 ~ 29060664 (-)
G29711 NA non-coding upstream 12420 29061582 ~ 29061782 (-)
G29715 NA non-coding upstream 16504 29065666 ~ 29067792 (-)
G29728 NA non-coding upstream 52799 29101961 ~ 29102212 (-)
G29730 NA non-coding upstream 54207 29103369 ~ 29103596 (-)
G29355 NA other downstream 344362 28703887 ~ 28704356 (-)
G28870 NA other downstream 982413 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 1405598 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 3766700 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 3767688 25280592 ~ 25281030 (-)
G29906 mef2a other upstream 231114 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 2082731 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 2376961 31426123 ~ 31444964 (-)
G33386 NA other upstream 2935609 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 4057957 33107119 ~ 33108497 (-)

Expression



Co-expression Network