Gene
RNA
| Item | Value |
|---|---|
| gene id | G29906 |
| gene name | mef2a |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 29280276 ~ 29280700 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mef2a | Enables several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; enzyme binding activity; and protein heterodimerization activity. Involved in several processes, including ERK5 cascade; positive regulation of cardiac muscle hypertrophy; and regulation of transcription by RNA polymerase II. Located in cytosol and nucleoplasm. Part of transcription regulator complex. Implicated in dilated cardiomyopathy. |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU34164 | True | 425 | TUCP | 0.48 | 1 | 29280276 | 29280700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532163 | NA | coding | downstream | 397645 | 28862981 ~ 28882631 (-) |
| LOC110520608 | LOC106573759 | coding | downstream | 437626 | 28835278 ~ 28842650 (-) |
| LOC110520584 | LOC106573758 | coding | downstream | 449329 | 28794166 ~ 28830947 (-) |
| hydin | hydin | coding | downstream | 542968 | 28663539 ~ 28737308 (-) |
| necab2 | LOC106573751 | coding | downstream | 618823 | 28535157 ~ 28661453 (-) |
| LOC118946030 | NA | coding | upstream | 91233 | 29371933 ~ 29380725 (-) |
| nr2f2 | LOC106573769 | coding | upstream | 382248 | 29662948 ~ 29672991 (-) |
| LOC118964375 | NA | coding | upstream | 997555 | 30278255 ~ 30284238 (-) |
| chd2 | LOC106573776 | coding | upstream | 1022919 | 30303619 ~ 30336415 (-) |
| LOC110520865 | NA | coding | upstream | 1066055 | 30346755 ~ 30352648 (-) |
| G29905 | NA | non-coding | downstream | 3179 | 29251828 ~ 29277097 (-) |
| G29805 | NA | non-coding | downstream | 107021 | 29173004 ~ 29173255 (-) |
| G29772 | NA | non-coding | downstream | 130488 | 29149523 ~ 29149788 (-) |
| G29755 | NA | non-coding | downstream | 143224 | 29136794 ~ 29137052 (-) |
| G29730 | NA | non-coding | downstream | 176680 | 29103369 ~ 29103596 (-) |
| G29972 | LOC100194703 | non-coding | upstream | 2110 | 29282810 ~ 29283108 (-) |
| G29977 | NA | non-coding | upstream | 4608 | 29285308 ~ 29285564 (-) |
| G29988 | NA | non-coding | upstream | 21339 | 29302039 ~ 29302325 (-) |
| G29904 | NA | non-coding | upstream | 32413 | 29313113 ~ 29313453 (-) |
| G29992 | NA | non-coding | upstream | 36472 | 29317172 ~ 29317512 (-) |
| G29355 | NA | other | downstream | 575920 | 28703887 ~ 28704356 (-) |
| G28870 | NA | other | downstream | 1213971 | 28057443 ~ 28066305 (-) |
| LOC110520292 | gnao1 | other | downstream | 1637156 | 27631001 ~ 27781768 (-) |
| G25117 | zfpm1 | other | downstream | 3998258 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 3999246 | 25280592 ~ 25281030 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 1851193 | 31131151 ~ 31132900 (-) |
| LOC110521048 | LOC100194695 | other | upstream | 2145423 | 31426123 ~ 31444964 (-) |
| G33386 | NA | other | upstream | 2704071 | 31984771 ~ 31989249 (-) |
| G35075 | LOC106573452 | other | upstream | 3826419 | 33107119 ~ 33108497 (-) |
| G35299 | NA | other | upstream | 4161668 | 33442368 ~ 33452413 (-) |
