G29904



Basic Information


Item Value
gene id G29904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 29313113 ~ 29313453 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU34161
TTGCAACTTGCAACCACAACAGCAAAAACAGCAACTACAAGTAAGTGCCAGACTAGACCAGTGACTACAATAAACTAGATTGtttcatttgttttttttctttgaacATTGGACTCCTGCAAACATAATCTTGATTGCACCCAGTACCTGATAACATCTGTTTGTGTACATAATTCAGTCCAACTACTTGAATGCTCTTCTTATTCATGTGAGACGTATTTAATTTAGATATGTCCTTTAATTGTATTTGCCATTCTCCTTCTTACAAAATGAAATGGAgttaaataataatattataatgatAACTATAAGGACCTTTCCtaccccatccatctctcccc

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU34161 True 341 lncRNA 0.34 1 29313113 29313453

Neighbor


gene id symbol gene type direction distance location
LOC110532163 NA coding downstream 430482 28862981 ~ 28882631 (-)
LOC110520608 LOC106573759 coding downstream 470463 28835278 ~ 28842650 (-)
LOC110520584 LOC106573758 coding downstream 482166 28794166 ~ 28830947 (-)
hydin hydin coding downstream 575805 28663539 ~ 28737308 (-)
necab2 LOC106573751 coding downstream 651660 28535157 ~ 28661453 (-)
LOC118946030 NA coding upstream 58480 29371933 ~ 29380725 (-)
nr2f2 LOC106573769 coding upstream 349495 29662948 ~ 29672991 (-)
LOC118964375 NA coding upstream 964802 30278255 ~ 30284238 (-)
chd2 LOC106573776 coding upstream 990166 30303619 ~ 30336415 (-)
LOC110520865 NA coding upstream 1033302 30346755 ~ 30352648 (-)
G29988 NA non-coding downstream 10788 29302039 ~ 29302325 (-)
G29977 NA non-coding downstream 27549 29285308 ~ 29285564 (-)
G29972 LOC100194703 non-coding downstream 30005 29282810 ~ 29283108 (-)
G29905 NA non-coding downstream 36016 29251828 ~ 29277097 (-)
G29805 NA non-coding downstream 139858 29173004 ~ 29173255 (-)
G29992 NA non-coding upstream 3719 29317172 ~ 29317512 (-)
G29994 NA non-coding upstream 6050 29319503 ~ 29319728 (-)
G30042 NA non-coding upstream 56099 29369552 ~ 29369753 (-)
G30051 NA non-coding upstream 60739 29374192 ~ 29374401 (-)
G30057 NA non-coding upstream 65955 29379408 ~ 29379621 (-)
G29906 mef2a other downstream 32413 29280276 ~ 29280700 (-)
G29355 NA other downstream 608757 28703887 ~ 28704356 (-)
G28870 NA other downstream 1246808 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 1669993 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 4031095 25281604 ~ 25282018 (-)
LOC110520932 LOC106573529 other upstream 1818440 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 2112670 31426123 ~ 31444964 (-)
G33386 NA other upstream 2671318 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 3793666 33107119 ~ 33108497 (-)
G35299 NA other upstream 4128915 33442368 ~ 33452413 (-)

Expression



Co-expression Network