Gene
RNA
| Item | Value |
|---|---|
| gene id | G30050 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 29374297 ~ 29374597 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU34308 | True | 301 | lncRNA | 0.44 | 1 | 29374297 | 29374597 |
29,372,800
29,373,200
29,373,600
29,374,000
29,374,400
29,374,800
29,375,200
29,375,600
29,376,000
29,376,400
29,376,800
29,377,200
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mctp2a | LOC106573768 | coding | upstream | 12734 | 29321672 ~ 29361563 (+) |
| mef2aa | mef2a | coding | upstream | 57755 | 29188958 ~ 29316547 (+) |
| LOC110520673 | LOC106573765 | coding | upstream | 289567 | 29074355 ~ 29084730 (+) |
| LOC110520661 | LOC106573762 | coding | upstream | 308199 | 28903691 ~ 29067795 (+) |
| LOC110520598 | LOC106573760 | coding | upstream | 513802 | 28844734 ~ 28860495 (+) |
| LOC110520750 | NA | coding | downstream | 91412 | 29466009 ~ 29490205 (+) |
| lysmd4 | LOC106573773 | coding | downstream | 688597 | 30063194 ~ 30083394 (+) |
| rgma | LOC106573775 | coding | downstream | 910031 | 30284628 ~ 30300184 (+) |
| fam174b | LOC106573778 | coding | downstream | 985169 | 30359766 ~ 30366602 (+) |
| LOC110532168 | LOC106573811 | coding | downstream | 1097515 | 30472112 ~ 30500532 (+) |
| G30041 | NA | non-coding | upstream | 4899 | 29369154 ~ 29369398 (+) |
| G29877 | NA | non-coding | upstream | 68947 | 29305063 ~ 29305350 (+) |
| G29876 | NA | non-coding | upstream | 69805 | 29304256 ~ 29304492 (+) |
| G29873 | NA | non-coding | upstream | 71990 | 29301881 ~ 29302307 (+) |
| G30072 | NA | non-coding | downstream | 14234 | 29388831 ~ 29389084 (+) |
| G30085 | NA | non-coding | downstream | 25226 | 29399823 ~ 29400028 (+) |
| G30086 | NA | non-coding | downstream | 25796 | 29400393 ~ 29400622 (+) |
| G30099 | NA | non-coding | downstream | 38517 | 29413114 ~ 29413668 (+) |
| G30102 | NA | non-coding | downstream | 40434 | 29415031 ~ 29415597 (+) |
| G28416 | carmil2 | other | upstream | 1325935 | 28047626 ~ 28048362 (+) |
| G28285 | LOC106573733 | other | upstream | 1519343 | 27853757 ~ 27854954 (+) |
| G28280 | NA | other | upstream | 1529286 | 27844640 ~ 27845011 (+) |
| G33249 | NA | other | downstream | 2475876 | 31850473 ~ 31850969 (+) |
| G33284 | NA | other | downstream | 2581933 | 31956530 ~ 31961547 (+) |
| G33681 | LOC106573476 | other | downstream | 3076257 | 32450854 ~ 32452385 (+) |
| G33768 | NA | other | downstream | 3238476 | 32613073 ~ 32617684 (+) |
| sema3e | LOC106573450 | other | downstream | 3948170 | 33268524 ~ 33326523 (+) |
