G30182



Basic Information


Item Value
gene id G30182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 29461236 ~ 29461844 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU34442
GTCATGTGATTATTGACTTGGTCAAATTAAACGGAcatatttcagtgtttgtttCTTTAATAGACATATGGTACCCAGAATAGACATATTATGGTATGGTGTTTCAACTCTGGGATAAatccaggatttttttttatttgcttTTGCTGTCTAGTGGCTTGCGCAAGCTTTCACCCCACTTGGCATTTatcctattttattgccttacaacctggaattaaaatagattttggggagGTGAAAACCTAAGAGTGCATaaatattcaccccccaaagtcaatactttgtagtgccacattttgcagcaataacagctgcaagtctcttggggtatgtctctataagcttggcacatctagccactgggatttttttcccatttttcatgtcaaaactgctccagctccttcaagttggatgggttccgctggtgtactgcaatctttaagtcaaaccacagattctcaattggattgaggtctgggctttgatttggtcattccaagacatttaaatgtttccccttaaaccactcgagtgttgctttagcagtatgcttagggaaattgtcctgctggaaggtgaacctccgtcccagtctcaaatctc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU34442 True 609 lncRNA 0.38 1 29461236 29461844

Neighbor


gene id symbol gene type direction distance location
LOC118946030 NA coding downstream 80511 29371933 ~ 29380725 (-)
LOC110532163 NA coding downstream 578605 28862981 ~ 28882631 (-)
LOC110520608 LOC106573759 coding downstream 618586 28835278 ~ 28842650 (-)
LOC110520584 LOC106573758 coding downstream 630289 28794166 ~ 28830947 (-)
hydin hydin coding downstream 723928 28663539 ~ 28737308 (-)
nr2f2 LOC106573769 coding upstream 201104 29662948 ~ 29672991 (-)
LOC118964375 NA coding upstream 816411 30278255 ~ 30284238 (-)
chd2 LOC106573776 coding upstream 841775 30303619 ~ 30336415 (-)
LOC110520865 NA coding upstream 884911 30346755 ~ 30352648 (-)
st8sia2 LOC100135855 coding upstream 911432 30373276 ~ 30400646 (-)
G30095 NA non-coding downstream 50666 29410107 ~ 29410570 (-)
G30057 NA non-coding downstream 81615 29379408 ~ 29379621 (-)
G30051 NA non-coding downstream 86835 29374192 ~ 29374401 (-)
G30042 NA non-coding downstream 91483 29369552 ~ 29369753 (-)
G29994 NA non-coding downstream 141508 29319503 ~ 29319728 (-)
G30464 NA non-coding upstream 127942 29589786 ~ 29590179 (-)
G30476 NA non-coding upstream 142103 29603947 ~ 29604148 (-)
G30501 NA non-coding upstream 178612 29640456 ~ 29640762 (-)
G30511 NA non-coding upstream 184360 29646204 ~ 29646704 (-)
G30514 NA non-coding upstream 186557 29648401 ~ 29648602 (-)
G29906 mef2a other downstream 180536 29280276 ~ 29280700 (-)
G29355 NA other downstream 756880 28703887 ~ 28704356 (-)
G28870 NA other downstream 1394931 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 1818116 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 4179218 25281604 ~ 25282018 (-)
LOC110520932 LOC106573529 other upstream 1670049 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 1964279 31426123 ~ 31444964 (-)
G33386 NA other upstream 2522927 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 3645275 33107119 ~ 33108497 (-)
G35299 NA other upstream 3980524 33442368 ~ 33452413 (-)

Expression



Co-expression Network