G30531



Basic Information


Item Value
gene id G30531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 29677140 ~ 29677779 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU34803
GGGCCTTTAAATAAAGACTTGACTGTATTCTATCTCTTTTGTCAGGAAGTGAATGTACATCAAAGCACCCTTTTCCCAACACTGGCAAATCATCTTCTCCATCACATTTCAGTAGGTGGCCACATCCCTACCATGTGTCTGACACCAGTAGTGTCTACTGTCTGCTGGAGGTCATCACTGTATGGTACAGCAGTTCTGGAAGCCTTTTACGcctggtggggtgtgtgtgtcggGGTAAATTTGATGCTTATATTTGGATAGAGAAAGATGCATTCTGGTATTATTAATACACAGTAATATATGTGCGATAGCAGCATGGTCATACTATGGACAAAGAGCATAGCTGGTTGTTGGCTTCCAAAGACACTAACAACACTGGAACAGGTTAACTATTTTCCATTCTATACATCATAATCATCATGTACAGGAAATGTAGTGGATAGGAAAGAAAGCACCCTGGCAATCAGCCTAACTAGAGATCGTTGAAACAAATTAATCCTTTGCCGTTTAAATTGACACTATAATCCATCATTGGCAAATCGAACTCTGTGAGCTATCTTGAAACTGCCGCCTTCTTAGATTGCCCCTTGGGGCGAACAGACACAGAGGGCAAAGAGAGTAATCTAAGCTGCTAAATGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU34803 True 640 lncRNA 0.42 1 29677140 29677779

Neighbor


gene id symbol gene type direction distance location
nr2f2 LOC106573769 coding downstream 4149 29662948 ~ 29672991 (-)
LOC118946030 NA coding downstream 296415 29371933 ~ 29380725 (-)
LOC110532163 NA coding downstream 794509 28862981 ~ 28882631 (-)
LOC110520608 LOC106573759 coding downstream 834490 28835278 ~ 28842650 (-)
LOC110520584 LOC106573758 coding downstream 846193 28794166 ~ 28830947 (-)
LOC118964375 NA coding upstream 600476 30278255 ~ 30284238 (-)
chd2 LOC106573776 coding upstream 625840 30303619 ~ 30336415 (-)
LOC110520865 NA coding upstream 668976 30346755 ~ 30352648 (-)
st8sia2 LOC100135855 coding upstream 695497 30373276 ~ 30400646 (-)
slco3a1 LOC106561149 coding upstream 736302 30414081 ~ 30461343 (-)
G30528 NA non-coding downstream 2269 29674641 ~ 29674871 (-)
G30526 NA non-coding downstream 4453 29672466 ~ 29672687 (-)
G30525 NA non-coding downstream 4746 29672181 ~ 29672394 (-)
G30514 NA non-coding downstream 28538 29648401 ~ 29648602 (-)
G30511 NA non-coding downstream 30436 29646204 ~ 29646704 (-)
G30533 NA non-coding upstream 2638 29680417 ~ 29680685 (-)
G30563 NA non-coding upstream 48606 29726385 ~ 29726600 (-)
G30582 NA non-coding upstream 60213 29737992 ~ 29738229 (-)
G30592 NA non-coding upstream 65010 29742789 ~ 29743020 (-)
G30604 NA non-coding upstream 70596 29748375 ~ 29748739 (-)
G29906 mef2a other downstream 396440 29280276 ~ 29280700 (-)
G29355 NA other downstream 972784 28703887 ~ 28704356 (-)
G28870 NA other downstream 1610835 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 2034020 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 4395122 25281604 ~ 25282018 (-)
LOC110520932 LOC106573529 other upstream 1454114 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 1748344 31426123 ~ 31444964 (-)
G33386 NA other upstream 2306992 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 3429340 33107119 ~ 33108497 (-)
G35299 NA other upstream 3764589 33442368 ~ 33452413 (-)

Expression



Co-expression Network