G30694



Basic Information


Item Value
gene id G30694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 29817704 ~ 29817992 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU34970
AcagataactgccaaaataaaggaaacaccatcaTAAAGTGTCTTAGAGCGTTAGTCCACCACGAGCCGcctgaacagcttcaatgcgccttggggcggcagggtagcctagtggttagagcgttggactagtaaccggaaggttgcgagttcaaaccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcccaggccatcattgaaaataagaatttgttcttaactgacttgcctggttaaataaaggttaaataaaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU34970 True 289 lncRNA 0.46 1 29817704 29817992

Neighbor


gene id symbol gene type direction distance location
nr2f2 LOC106573769 coding downstream 144713 29662948 ~ 29672991 (-)
LOC118946030 NA coding downstream 436979 29371933 ~ 29380725 (-)
LOC110532163 NA coding downstream 935073 28862981 ~ 28882631 (-)
LOC110520608 LOC106573759 coding downstream 975054 28835278 ~ 28842650 (-)
LOC110520584 LOC106573758 coding downstream 986757 28794166 ~ 28830947 (-)
LOC118964375 NA coding upstream 460263 30278255 ~ 30284238 (-)
chd2 LOC106573776 coding upstream 485627 30303619 ~ 30336415 (-)
LOC110520865 NA coding upstream 528763 30346755 ~ 30352648 (-)
st8sia2 LOC100135855 coding upstream 555284 30373276 ~ 30400646 (-)
slco3a1 LOC106561149 coding upstream 596089 30414081 ~ 30461343 (-)
G30664 NA non-coding downstream 27211 29790083 ~ 29790493 (-)
G30604 NA non-coding downstream 68965 29748375 ~ 29748739 (-)
G30592 NA non-coding downstream 74684 29742789 ~ 29743020 (-)
G30582 NA non-coding downstream 79475 29737992 ~ 29738229 (-)
G30563 NA non-coding downstream 91104 29726385 ~ 29726600 (-)
G30774 NA non-coding upstream 52237 29870229 ~ 29870458 (-)
G30821 NA non-coding upstream 84085 29902077 ~ 29902367 (-)
G30848 NA non-coding upstream 101615 29919607 ~ 29919988 (-)
G30856 NA non-coding upstream 107801 29925793 ~ 29926023 (-)
G30970 NA non-coding upstream 133339 29951331 ~ 29956036 (-)
G29906 mef2a other downstream 537004 29280276 ~ 29280700 (-)
G29355 NA other downstream 1113348 28703887 ~ 28704356 (-)
G28870 NA other downstream 1751399 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 2174584 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 4535686 25281604 ~ 25282018 (-)
LOC110520932 LOC106573529 other upstream 1313901 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 other upstream 1608131 31426123 ~ 31444964 (-)
G33386 NA other upstream 2166779 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 3289127 33107119 ~ 33108497 (-)
G35299 NA other upstream 3624376 33442368 ~ 33452413 (-)

Expression



Co-expression Network