G31374



Basic Information


Item Value
gene id G31374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 30403301 ~ 30404602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU35693
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgatccATCAGCTGCTAGGGCATTGTATCACACTACACATCATTCATTTAGGAATTCATCGTAGAGGCTCATTTCTCCTGAGCCTCTAGTTTGTGAAAGTACATACTACTGTGAAACATTTTATAAATCAAACTACTGCCTCTGTAATGTAGCAGAAGTCTACCCCTCAAGTCTAGTCTATTGAAGTAGTTCCAGGCCTTTAATGATTGCAaatcacccccccaaaaaacttgtTTTAAGTAAATACTTATTCTATTTCATCTTCAGGATATTCTTCAAACACAAACTTTTATCTTGGTTTTTAGTATTTTttacacatacacaattcattaAATCACCCAATTTGATctgataattatattaattaaCAGTTTAATCCTGCTATGGCAAGTGTTTTCGTAATCAAAGATCACAATGTAATTATAATTTGTAAGAGCTTCAAAATATTTAGGAACATACAGGACAAATTTCAAGAGCTATAGGAGTACACTCACAGTGTTACCTTGAACAAAAATCATCATATTCTCAAATTAGAGTTCACTGCTAAAAAGCAACTGATTGCAGCTAAAAAAAAATCCACCATTTTGGTAATTCCAACCAATTGTTGACATAGATTGTTGATTTCTCTACTGTGGGTTTTAGACACCATTGTGTCAGACAGCACAGTGAGACCCTTCAATAAAGGAGAGAGGCTCATGAATACCAATGGTATTGGTTCGAGCATCATAGACACCTCAATTACTAACACACTCCTCGACATGTATCACACTCTGGATCACATCAAAGCCTGACAAACGCAATTATAGTTCATCAAACAAAACCTATTTTGAATGTAAAACCCATGCATGATCAGCCTCTGTTCATTCCATCCAGTGCTCTCAAACAAATGAATGCTTCCCCTTGTGAATCAAACACAGCATCACAAAACATGACAGTTTCAAACTGCAAAGTGCAAACAAAAAATAAGGATGAATTACCATTTTTAGCATCACACTTAAATTCAGGCGTTCATATTCAAAGTAATGTTTATATTTTGGCCCAATGGAGGTTGACTGGGTGACATTTAAAGGAAAAAGAGAGTTTGATGTTAATTGGGTTACTGTAGAGGTTGAGATATGTTGAGATATGGCCCACAAACAATTCTGTAAACAGTGATTGACTTTTGTGATGTAAAGAAAAACTCTTCACTCTGTTTTTCGCTACAGTTTGTGGTTTGGGTGAtaaataaaggcaaaaaaaagtaacaaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU35693 True 1302 lncRNA 0.36 1 30403301 30404602

Neighbor


gene id symbol gene type direction distance location
st8sia2 LOC100135855 coding downstream 2655 30373276 ~ 30400646 (-)
LOC110520865 NA coding downstream 50653 30346755 ~ 30352648 (-)
chd2 LOC106573776 coding downstream 66886 30303619 ~ 30336415 (-)
LOC118964375 NA coding downstream 119063 30278255 ~ 30284238 (-)
nr2f2 LOC106573769 coding downstream 730310 29662948 ~ 29672991 (-)
slco3a1 LOC106561149 coding upstream 9479 30414081 ~ 30461343 (-)
plin1 plin1 coding upstream 112817 30517419 ~ 30549437 (-)
LOC110520931 LOC106573506 coding upstream 309236 30713838 ~ 30981725 (-)
LOC110520932 LOC106573529 coding upstream 726549 31131151 ~ 31132900 (-)
LOC110521048 LOC100194695 coding upstream 1022796 31426123 ~ 31444964 (-)
G31451 NA non-coding downstream 58821 30343905 ~ 30344480 (-)
G31386 NA non-coding downstream 193082 30209986 ~ 30210219 (-)
G31192 NA non-coding downstream 205151 30197923 ~ 30198150 (-)
G31045 NA non-coding downstream 319871 30082180 ~ 30083430 (-)
G31472 NA non-coding upstream 3492 30408094 ~ 30408300 (-)
G31474 NA non-coding upstream 6278 30410880 ~ 30411088 (-)
G31513 NA non-coding upstream 83670 30488272 ~ 30495194 (-)
G31546 NA non-coding upstream 144966 30549568 ~ 30549776 (-)
G29906 mef2a other downstream 1122601 29280276 ~ 29280700 (-)
G29355 NA other downstream 1698945 28703887 ~ 28704356 (-)
G28870 NA other downstream 2336996 28057443 ~ 28066305 (-)
LOC110520292 gnao1 other downstream 2760181 27631001 ~ 27781768 (-)
G25117 zfpm1 other downstream 5121283 25281604 ~ 25282018 (-)
G33386 NA other upstream 1580169 31984771 ~ 31989249 (-)
G35075 LOC106573452 other upstream 2702517 33107119 ~ 33108497 (-)
G35299 NA other upstream 3037766 33442368 ~ 33452413 (-)

Expression



Co-expression Network