Gene
RNA
| Item | Value |
|---|---|
| gene id | G33021 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 31562716 ~ 31563263 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proline-serine-threonine phosphatase-interacting protein 1-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU37428 | True | 548 | lncRNA | 0.43 | 1 | 31562716 | 31563263 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521059 | scaper | coding | downstream | 13428 | 31461269 ~ 31549288 (-) |
| LOC110521048 | LOC100194695 | coding | downstream | 117752 | 31426123 ~ 31444964 (-) |
| LOC110520932 | LOC106573529 | coding | downstream | 429816 | 31131151 ~ 31132900 (-) |
| LOC110520931 | LOC106573506 | coding | downstream | 580991 | 30713838 ~ 30981725 (-) |
| plin1 | plin1 | coding | downstream | 1013279 | 30517419 ~ 30549437 (-) |
| tspan3a | tspan3 | coding | upstream | 3111 | 31566374 ~ 31582335 (-) |
| LOC110521155 | LOC106573493 | coding | upstream | 38125 | 31601388 ~ 31609175 (-) |
| LOC110521169 | LOC106573492 | coding | upstream | 50913 | 31614176 ~ 31638698 (-) |
| LOC110532195 | NA | coding | upstream | 228116 | 31791379 ~ 31794152 (-) |
| LOC110521239 | LOC106573487 | coding | upstream | 245649 | 31808912 ~ 31842003 (-) |
| G33025 | NA | non-coding | downstream | 2934 | 31557866 ~ 31559782 (-) |
| G32952 | NA | non-coding | downstream | 218264 | 31344251 ~ 31344452 (-) |
| G32875 | NA | non-coding | downstream | 342942 | 31218104 ~ 31219774 (-) |
| G32298 | NA | non-coding | downstream | 474721 | 31087694 ~ 31087995 (-) |
| G33023 | NA | non-coding | upstream | 15181 | 31578444 ~ 31600483 (-) |
| G33104 | NA | non-coding | upstream | 48679 | 31611942 ~ 31613064 (-) |
| G33109 | NA | non-coding | upstream | 53858 | 31617121 ~ 31682005 (-) |
| G33212 | NA | non-coding | upstream | 213902 | 31777165 ~ 31782159 (-) |
| G33246 | NA | non-coding | upstream | 284428 | 31847691 ~ 31847899 (-) |
| G29906 | mef2a | other | downstream | 2282016 | 29280276 ~ 29280700 (-) |
| G29355 | NA | other | downstream | 2858360 | 28703887 ~ 28704356 (-) |
| G28870 | NA | other | downstream | 3496411 | 28057443 ~ 28066305 (-) |
| G33386 | NA | other | upstream | 421508 | 31984771 ~ 31989249 (-) |
| G35075 | LOC106573452 | other | upstream | 1543856 | 33107119 ~ 33108497 (-) |
| G35299 | NA | other | upstream | 1879105 | 33442368 ~ 33452413 (-) |
| G35628 | NA | other | upstream | 2304295 | 33867558 ~ 33868045 (-) |
| G36141 | NA | other | upstream | 2714437 | 34277700 ~ 34362736 (-) |
