G33386


Basic Information

Item Value
gene id G33386
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 31984771 ~ 31989249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU37804
CAGTATCCAGGACCACAGCCCAATACATGTTGAGGCTAATGAGATCATAAAAAGCAACAAATACTAACGCCTGGTAGATTTCCTCAAAGATGTCCTTGAATCTGCCATCATAAGCTTTGAGAATGGTGTTCTTGGTGCTCAGATAGAGGGGCCACTTCTTGCCAATGGCATACTGGAAGCAGCTATGTGCGAAGCCTCCACAGCCACCTCCGGGGAACTTGTATACCTCCCACTCCTGGCCTTTGCTCCCATCAGTAGGAGAGAAGACCATCTTGAAAGTGCCTGGTTTGCTGACAACAAAGTCTGTTGCTCTGTACTGTCACCAAAGGCATGTCTGCCAATGGTGATGGGCTGTGTCCAACCTGGAACAAGCCTGGGAATGTTCTTGCAGATGATTGGCTCACGGAAGACTGTGCCTCCCAGGATGTTCCTGATGGTTCCATTGGGGCTCTTCCACATCTTTTTCAGTTTGAACTCTTTGTTCGTCAGGAGTGATGGTGGCACATTTAACAGCGACATGGTACTTCTGGGTGGCGATGGCAGAGTCAATGGTGACCTGGTCGTCAGTCTGGTCACGGTATGGCAAACCCAGGTCATAGTACTTCAGCTCCACATCCACATTGGAGAGGATGAGCTGGAAAAGCAGAACATAGTGACAGAGGAATCAGAACTCATTCTTTCTTTACATTGTCAACTGCTCTACAGGA
>TU37803
TAGGATCCAACAAGGAAGATTTATTAGCAAATATTCTTGACATGGCCTTCAAGTTTCTTCCAAGGTATAATACAGTACTTCACATATAAATATAACCTCAGAGACATGGGGAAAGAAGGTTGAAGGAGTGCTAGATGGAACAGAGCTCTGAATAGAAGGACCTAATCTGGTACACTGAATAATGCTCTACAGATGACTTCTTCCTTCAGACAATACGCATGTGGATATCTTGACCTAAATTAAAAACGAGGTACAAAAACAGAATGACATTTGTCATTTGCAGGCTAGCTGTACTCCAAATTTAAATCCTTCATTTGCCCAGGGCTTTGTCCAGGTTGTTCTTGATGGCATCCAGGAAGTCCTCAGTGTTGACGTAGTGTACATTCAGCTTGCATGGAAAGTCCGTGAATGCAGCCGGCGAGGTCCTTAGTCATAACACCACTCTCAACGGTCTCCACACATACCTTCTCCAGAGTCAGGGCGAACTGATCAGGTCAGGGTTCCCATCAAGTTTACCCCGATGCTCAAGCCCTCTGGTCCAGGCAAAGATGCTGGCAATGGGGTTGGTGCTGGTTGGGTTTCCTTCTGGTGCTCGCGGTAGTGTCTGGTCACTGTGCCGTGGGCTGCCTCAGCCTCAATGGTCTTACCATCAGGACATACCAGCACTGACGTCATCAGACCCAGAGAGCCGACCCTGAGCCAGGATGTCAGACTGTACGTCTCCATCGTAGTTCTTGCAGGCCCACACGAAGGCACCATCAGACTTCAGCACCTGGGCAACCATGTCATCAATGAGCCTGTGCTCATACCAGATCTTCAGCTTGTCAAACTCTGGCTTGTAGTTCCTATGGACACAAAACACATGGTAGTGTGAGAGCACTGCATTA

Function

NR:

description
mitochondrial isocitrate dehydrogenase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37804 False 707 TUCP 0.49 4 31984771 31986150
TU37803 True 887 lncRNA 0.49 5 31987359 31989249

Neighbor

gene id symbol gene type direction distance location
LOC110521239 LOC106573487 coding downstream 145356 31808912 ~ 31842003 (-)
LOC110532195 NA coding downstream 193207 31791379 ~ 31794152 (-)
LOC110521169 LOC106573492 coding downstream 348661 31614176 ~ 31638698 (-)
LOC110521155 LOC106573493 coding downstream 378184 31601388 ~ 31609175 (-)
tspan3a tspan3 coding downstream 405024 31566374 ~ 31582335 (-)
LOC110521251 LOC106573484 coding upstream 51 31989300 ~ 31997662 (-)
LOC110521435 NA coding upstream 226254 32215495 ~ 32217278 (-)
LOC110521366 LOC106573474 coding upstream 229509 32218758 ~ 32270230 (-)
pex11a pex11a coding upstream 335686 32324935 ~ 32328199 (-)
LOC110521442 NA coding upstream 339461 32328710 ~ 32330586 (-)
G33252 NA non-coding downstream 135747 31851337 ~ 31851612 (-)
G33246 NA non-coding downstream 139460 31847691 ~ 31847899 (-)
G33212 NA non-coding downstream 205200 31777165 ~ 31782159 (-)
G33109 NA non-coding downstream 305354 31617121 ~ 31682005 (-)
G33104 NA non-coding downstream 374295 31611942 ~ 31613064 (-)
G33437 NA non-coding upstream 17375 32006624 ~ 32006831 (-)
G33448 NA non-coding upstream 24378 32013627 ~ 32013835 (-)
G34092 NA non-coding upstream 213522 32202771 ~ 32203302 (-)
G34093 NA non-coding upstream 215279 32204528 ~ 32205041 (-)
G34094 NA non-coding upstream 218745 32207994 ~ 32209099 (-)
G33386 NA other downstream 1209 31984771 ~ 31989249 (-)
LOC110521048 LOC100194695 other downstream 542410 31426123 ~ 31444964 (-)
LOC110520932 LOC106573529 other downstream 854468 31131151 ~ 31132900 (-)
G29906 mef2a other downstream 2706659 29280276 ~ 29280700 (-)
G29355 NA other downstream 3283003 28703887 ~ 28704356 (-)
G35075 LOC106573452 other upstream 1117870 33107119 ~ 33108497 (-)
G35299 NA other upstream 1453119 33442368 ~ 33452413 (-)
G35628 NA other upstream 1878309 33867558 ~ 33868045 (-)
G36141 NA other upstream 2288451 34277700 ~ 34362736 (-)
G36196 NA other upstream 2352313 34341562 ~ 34381232 (-)
G28870 NA other downstream 3918466 28057443 ~ 28066305 (-)

Expression


Co-expression Network