G33474


Basic Information

Item Value
gene id G33474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 32217150 ~ 32217924 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU37898
CAAATGATGAcgttagtgatcttcaggtcagaaagtaggagctctagaaagaggcccgagttcgcGAATTGGAAGACcgttcaaatatattttttccagTTGAAGCtcgttttttccgagttcccagttgattTGAACACACTGAGGTCGGAAATTTCTGAGTTACCAGTTGTTTTGACGCGacaatagagccccacagtggggaaatggttccaatattTTTCCCACCATTTGTTTTCATAACAATGTAAATATATCTTAGACAAGATTACTTTAATCAACATATTCAACTCtactctcagattcgaaaatgctaatttGCATGGAAATAGACATCACGTCAACTAGCTGCTAATTTTGCTAGCAGGtattgtcaatttaaaacttgcacaagacagttcacagaattgtccattaAATAAATGTCGCCAATGTATTCATTACgaaatttagctaacattagataataaataaaggttcaataaaaataattAATCCAGATATTCTTACTTTTGACTCGATTCGGCAGTCtcatccagatcatcatggcatttgtagttgttTATGATAGCCatattagcagctaattagcatttcattttgggAGGGTAAATGCAGGCGAATATATTGattaaagtcaccttgtcctagagagatttacacggttatcaaaacatcacgccagggtaagcctacaccttcaaacacagcccttatttgaagtgtttctaaaatcccctatgggaaaaatgtatggtggaaaagaacaatttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37898 True 775 lncRNA 0.45 1 32217150 32217924

Neighbor

gene id symbol gene type direction distance location
zgc:162879 LOC106573468 coding upstream 1597 32204475 ~ 32215553 (+)
LOC110521304 LOC106573467 coding upstream 12838 32099209 ~ 32204312 (+)
LOC110521263 idhp coding upstream 227901 31980285 ~ 31989249 (+)
LOC110520271 LOC106573485 coding upstream 250274 31964564 ~ 31966876 (+)
LOC110521218 LOC106573489 coding upstream 434955 31668656 ~ 31782195 (+)
LOC110521325 LOC106573469 coding downstream 51130 32269054 ~ 32318545 (+)
si:dkey-30c15.2 LOC106573475 coding downstream 135444 32353368 ~ 32360898 (+)
terb1 LOC106573465 coding downstream 218982 32436906 ~ 32446878 (+)
si:dkey-30c15.13 LOC106573478 coding downstream 263538 32481462 ~ 32485466 (+)
LOC110521454 LOC106573411 coding downstream 515595 32733519 ~ 32751025 (+)
G33576 NA non-coding upstream 8025 32208923 ~ 32209125 (+)
G33432 NA non-coding upstream 214327 32002390 ~ 32002823 (+)
G33334 NA non-coding upstream 248765 31968063 ~ 31968385 (+)
G33258 NA non-coding upstream 360472 31856372 ~ 31856678 (+)
G33251 NA non-coding upstream 365675 31851219 ~ 31851475 (+)
G33484 NA non-coding downstream 1525 32219449 ~ 32225528 (+)
G33606 NA non-coding downstream 55390 32273314 ~ 32273520 (+)
G33471 NA non-coding downstream 60523 32278447 ~ 32333634 (+)
G33478 NA non-coding downstream 124941 32342865 ~ 32345335 (+)
G33639 LOC106573471 non-coding downstream 154472 32372396 ~ 32374666 (+)
G33284 NA other upstream 255603 31956530 ~ 31961547 (+)
G33249 NA other upstream 366181 31850473 ~ 31850969 (+)
mef2aa mef2a other upstream 2963932 29188958 ~ 29316547 (+)
LOC110520661 LOC106573762 other upstream 3149355 28903691 ~ 29067795 (+)
G28416 carmil2 other upstream 4168788 28047626 ~ 28048362 (+)
G33681 LOC106573476 other downstream 232930 32450854 ~ 32452385 (+)
G33768 NA other downstream 395149 32613073 ~ 32617684 (+)
sema3e LOC106573450 other downstream 1104843 33268524 ~ 33326523 (+)
LOC118964465 LOC106573449 other downstream 1173799 33371468 ~ 33402776 (+)
G34963 NA other downstream 1483853 33701777 ~ 33703462 (+)

Expression

G33474 Expression in all Baseline Samples

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G33474 Expression in each Bioproject

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G33474 Expression in each Sample
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Co-expression Network