Gene
RNA
| Item | Value |
|---|---|
| gene id | G33730 |
| gene name | frmd4a |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 32550730 ~ 32551971 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| frmd4a | Predicted to act upstream of or within transmembrane transport. Predicted to be located in cytoplasm; cytoskeleton; and membrane. Predicted to be integral component of membrane. Predicted to be active in adherens junction and bicellular tight junction. |
| description |
|---|
| PREDICTED: FERM domain-containing protein 4A isoform X9 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU38178 | True | 221 | lncRNA | 0.56 | 2 | 32550730 | 32551971 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-30c15.13 | LOC106573478 | coding | upstream | 65264 | 32481462 ~ 32485466 (+) |
| terb1 | LOC106573465 | coding | upstream | 103852 | 32436906 ~ 32446878 (+) |
| si:dkey-30c15.2 | LOC106573475 | coding | upstream | 189832 | 32353368 ~ 32360898 (+) |
| LOC110521325 | LOC106573469 | coding | upstream | 232185 | 32269054 ~ 32318545 (+) |
| zgc:162879 | LOC106573468 | coding | upstream | 335177 | 32204475 ~ 32215553 (+) |
| LOC110521454 | LOC106573411 | coding | downstream | 181548 | 32733519 ~ 32751025 (+) |
| LOC110521475 | LOC106573462 | coding | downstream | 199475 | 32751446 ~ 32753760 (+) |
| si:ch211-233h19.2 | LOC106573455 | coding | downstream | 292210 | 32844181 ~ 32867560 (+) |
| sema3d | LOC106573452 | coding | downstream | 485140 | 33037111 ~ 33108578 (+) |
| LOC110521527 | LOC106573451 | coding | downstream | 664387 | 33216358 ~ 33245765 (+) |
| G33710 | NA | non-coding | upstream | 39197 | 32510970 ~ 32511533 (+) |
| G33703 | NA | non-coding | upstream | 69667 | 32480782 ~ 32481063 (+) |
| G33702 | NA | non-coding | upstream | 70043 | 32480467 ~ 32480687 (+) |
| G33701 | NA | non-coding | upstream | 75602 | 32474898 ~ 32475128 (+) |
| G33772 | NA | non-coding | downstream | 69024 | 32620995 ~ 32641296 (+) |
| G33806 | NA | non-coding | downstream | 109062 | 32661033 ~ 32661289 (+) |
| G33809 | NA | non-coding | downstream | 112906 | 32664877 ~ 32665175 (+) |
| G33812 | NA | non-coding | downstream | 117691 | 32669662 ~ 32669873 (+) |
| G33813 | NA | non-coding | downstream | 120762 | 32672733 ~ 32673005 (+) |
| G33681 | LOC106573476 | other | upstream | 98345 | 32450854 ~ 32452385 (+) |
| G33284 | NA | other | upstream | 589183 | 31956530 ~ 31961547 (+) |
| G33249 | NA | other | upstream | 699761 | 31850473 ~ 31850969 (+) |
| mef2aa | mef2a | other | upstream | 3297512 | 29188958 ~ 29316547 (+) |
| LOC110520661 | LOC106573762 | other | upstream | 3482935 | 28903691 ~ 29067795 (+) |
| G33768 | NA | other | downstream | 61102 | 32613073 ~ 32617684 (+) |
| sema3e | LOC106573450 | other | downstream | 770796 | 33268524 ~ 33326523 (+) |
| LOC118964465 | LOC106573449 | other | downstream | 839752 | 33371468 ~ 33402776 (+) |
| G34963 | NA | other | downstream | 1149806 | 33701777 ~ 33703462 (+) |
| G35699 | NA | other | downstream | 1406126 | 33958097 ~ 33958681 (+) |
