Gene
RNA
| Item | Value |
|---|---|
| gene id | G34298 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 32614494 ~ 32616115 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU38803 | True | 368 | lncRNA | 0.48 | 2 | 32614494 | 32616115 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521272 | LOC106597893 | coding | downstream | 113659 | 32485245 ~ 32500835 (-) |
| LOC110521397 | LOC106573476 | coding | downstream | 157294 | 32450847 ~ 32457200 (-) |
| LOC110521450 | NA | coding | downstream | 189245 | 32423864 ~ 32425249 (-) |
| pdp2 | LOC106573473 | coding | downstream | 191588 | 32416697 ~ 32422906 (-) |
| LOC110521335 | LOC106573470 | coding | downstream | 203321 | 32402376 ~ 32411173 (-) |
| LOC110521494 | LOC106573457 | coding | upstream | 145082 | 32761197 ~ 32783979 (-) |
| LOC118964459 | NA | coding | upstream | 223330 | 32839445 ~ 32844732 (-) |
| grm3 | LOC106573453 | coding | upstream | 258801 | 32867631 ~ 32924599 (-) |
| lrrc4.2 | LOC106573446 | coding | upstream | 1108734 | 33724849 ~ 33729966 (-) |
| rbm28 | rbm28 | coding | upstream | 1328719 | 33944834 ~ 33953935 (-) |
| G34260 | NA | non-coding | downstream | 91429 | 32522679 ~ 32523065 (-) |
| G34257 | NA | non-coding | downstream | 97037 | 32517213 ~ 32517457 (-) |
| G34248 | NA | non-coding | downstream | 110945 | 32503328 ~ 32503549 (-) |
| G34242 | NA | non-coding | downstream | 137139 | 32477134 ~ 32477355 (-) |
| G34210 | NA | non-coding | downstream | 168093 | 32444925 ~ 32446401 (-) |
| G34300 | NA | non-coding | upstream | 78 | 32616193 ~ 32616530 (-) |
| G34304 | NA | non-coding | upstream | 4922 | 32621037 ~ 32624078 (-) |
| G34330 | NA | non-coding | upstream | 43440 | 32659555 ~ 32659797 (-) |
| G34334 | NA | non-coding | upstream | 47704 | 32663819 ~ 32664050 (-) |
| G34339 | NA | non-coding | upstream | 55743 | 32671858 ~ 32672058 (-) |
| G33386 | NA | other | downstream | 628344 | 31984771 ~ 31989249 (-) |
| LOC110521048 | LOC100194695 | other | downstream | 1169545 | 31426123 ~ 31444964 (-) |
| LOC110520932 | LOC106573529 | other | downstream | 1481603 | 31131151 ~ 31132900 (-) |
| G29906 | mef2a | other | downstream | 3333794 | 29280276 ~ 29280700 (-) |
| G29355 | NA | other | downstream | 3910138 | 28703887 ~ 28704356 (-) |
| G35075 | LOC106573452 | other | upstream | 491004 | 33107119 ~ 33108497 (-) |
| G35299 | NA | other | upstream | 826253 | 33442368 ~ 33452413 (-) |
| G35628 | NA | other | upstream | 1251443 | 33867558 ~ 33868045 (-) |
| G36141 | NA | other | upstream | 1661585 | 34277700 ~ 34362736 (-) |
| G36196 | NA | other | upstream | 1725447 | 34341562 ~ 34381232 (-) |
