Gene
RNA
| Item | Value |
|---|---|
| gene id | G34348 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 32760172 ~ 32760774 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU38865 | True | 603 | lncRNA | 0.41 | 1 | 32760172 | 32760774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532201 | LOC106573459 | coding | downstream | 25723 | 32530266 ~ 32734449 (-) |
| LOC110521272 | LOC106597893 | coding | downstream | 259337 | 32485245 ~ 32500835 (-) |
| LOC110521397 | LOC106573476 | coding | downstream | 302972 | 32450847 ~ 32457200 (-) |
| LOC110521450 | NA | coding | downstream | 334923 | 32423864 ~ 32425249 (-) |
| pdp2 | LOC106573473 | coding | downstream | 337266 | 32416697 ~ 32422906 (-) |
| LOC110521494 | LOC106573457 | coding | upstream | 423 | 32761197 ~ 32783979 (-) |
| LOC118964459 | NA | coding | upstream | 78671 | 32839445 ~ 32844732 (-) |
| grm3 | LOC106573453 | coding | upstream | 114142 | 32867631 ~ 32924599 (-) |
| lrrc4.2 | LOC106573446 | coding | upstream | 964075 | 33724849 ~ 33729966 (-) |
| rbm28 | rbm28 | coding | upstream | 1184060 | 33944834 ~ 33953935 (-) |
| G34406 | NA | non-coding | downstream | 5418 | 32754388 ~ 32754754 (-) |
| G34399 | LOC106573462 | non-coding | downstream | 5970 | 32748929 ~ 32754202 (-) |
| G34392 | NA | non-coding | downstream | 34091 | 32725800 ~ 32726081 (-) |
| G34391 | NA | non-coding | downstream | 35301 | 32724585 ~ 32724871 (-) |
| G34382 | NA | non-coding | downstream | 44172 | 32715707 ~ 32716000 (-) |
| G34409 | NA | non-coding | upstream | 2481 | 32763255 ~ 32765669 (-) |
| G34424 | NA | non-coding | upstream | 17887 | 32778661 ~ 32806126 (-) |
| G34458 | NA | non-coding | upstream | 73893 | 32834667 ~ 32835184 (-) |
| G34457 | NA | non-coding | upstream | 74472 | 32835246 ~ 32836115 (-) |
| G33386 | NA | other | downstream | 774022 | 31984771 ~ 31989249 (-) |
| LOC110521048 | LOC100194695 | other | downstream | 1315223 | 31426123 ~ 31444964 (-) |
| LOC110520932 | LOC106573529 | other | downstream | 1627281 | 31131151 ~ 31132900 (-) |
| G29906 | mef2a | other | downstream | 3479472 | 29280276 ~ 29280700 (-) |
| G29355 | NA | other | downstream | 4055816 | 28703887 ~ 28704356 (-) |
| G35075 | LOC106573452 | other | upstream | 346345 | 33107119 ~ 33108497 (-) |
| G35299 | NA | other | upstream | 681594 | 33442368 ~ 33452413 (-) |
| G35628 | NA | other | upstream | 1106784 | 33867558 ~ 33868045 (-) |
| G36141 | NA | other | upstream | 1516926 | 34277700 ~ 34362736 (-) |
| G36196 | NA | other | upstream | 1580788 | 34341562 ~ 34381232 (-) |
